A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 9001 - 9100:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
PLEKHH3   ENSSSCG00000017391 12:17709682-17718288   CU928483,CH242-17I6,12:17706452-17731169
(Clone quality: bE17I6 on chr=12; Num_of_Contigs=8; )
PLEKHJ1   ENSSSCG00000013453 2:47043893-47046535   CU929035,CH242-88G19,2:47043234-47050088
(Clone quality: bE88G19 on chr=2; Num_of_Contigs=27; )
PLEKHM2   ENSSSCG00000003468 6:51505946-51522784   CU457447,CH242-71A8,6:51494097-51525122
(Clone quality: bE71A8 on chr=6; Num_of_Contigs=17; )
PLEKHM3   ENSSSCG00000016141 15:103977848-104018507   CU929834,CH242-55M19,15:103961068-104027043
(Clone quality: bE55M19 on chr=15; Num_of_Contigs=4; )
PLEKHO2   ENSSSCG00000004547 1:110364178-110373868   CU582916,CH242-24C1,1:110333852-110375167
(Clone quality: bE24C1 on chr=1; Num_of_Contigs=8; )
PLG ENSSSCG00000004038 1:8079895-8127335 FP085554,CH242-84O6,1:8054542-8235565
(Clone quality: bE84O6 on chr=1; Num_of_Contigs=4; ) 		 
PLIN   ENSSSCG00000001844 7:60662143-60676154   CT737411,CH242-149F11,7:60651189-60738814
(Clone quality: bE149F11 on chr=7; Num_of_Contigs=3; )
PLIN4   ENSSSCG00000013512 2:48702269-48711216    
PLIN5   ENSSSCG00000013513 2:48716288-48725433   CU972396,CH242-401E10,2:48706443-48734965
(Clone quality: bE401E10 on chr=2; Num_of_Contigs=4; )
PLK2   ENSSSCG00000016925 16:35374482-35380481   CU914321,CH242-270D14,16:35371804-35396519
(Clone quality: bE270D14 on chr=16; Num_of_Contigs=4; )
PLK3 ENSSSCG00000003928 6:119351085-119355913   CU928738,CH242-6J15,6:119339955-119396828
(Clone quality: bE6J15 on chr=6; Num_of_Contigs=6; )
PLK4 ENSSSCG00000009076 8:83546053-83625511    
PLK5P   ENSSSCG00000013434 2:46542519-46550190   CU972485,CH242-416N2,2:46524462-46568465
(Clone quality: bE416N2 on chr=2; Num_of_Contigs=2; )
PLLP   ENSSSCG00000002818 6:20056843-20062993   FP102873,CH242-277I7,6:20046883-20107879
(Clone quality: bE277I7 on chr=6; Num_of_Contigs=4; )
PLN ENSSSCG00000004248 1:45243664-45253241   CU655900,CH242-162D20,1:45239157-45309340
(Clone quality: bE162D20 on chr=1; Num_of_Contigs=2; )
PLOD1 ENSSSCG00000003433 6:48861113-48891422   CU695168,CH242-2E14,6:48812011-48903740
(Clone quality: bE2E14 on chr=6; Num_of_Contigs=4; )
PLOD2   ENSSSCG00000011689 13:70572803-70628295   CU855741,CH242-319B9,13:70447513-70637414
(Clone quality: bE319B9 on chr=13; Num_of_Contigs=2; )
PLP ENSSSCG00000012536 X:82356041-82372396   FP015842,CH242-149K17,X:82322663-82377772
(Clone quality: bE149K17 on chr=X; Num_of_Contigs=5; )
PLP1   ENSSSCG00000012536 X:82356041-82372396   FP015842,CH242-149K17,X:82322663-82377772
(Clone quality: bE149K17 on chr=X; Num_of_Contigs=5; )
PLP2 ENSSSCG00000012294 X:42696520-42699471   FP067404,CH242-247J8,X:42680766-42706990
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
PLRG1   ENSSSCG00000008996 8:63974808-63991046   CU694669,CH242-131H20,8:63973597-64050873
(Clone quality: bE131H20 on chr=8; Num_of_Contigs=9; )
PLS3   ENSSSCG00000012597 X:92834015-92920193    
PLSCR4 ENSSSCG00000011690 13:70668942-70698710   CU855852,CH242-90H6,13:70661837-70722848
(Clone quality: bE90H6 on chr=13; Num_of_Contigs=3; )
PLSCR5   ENSSSCG00000011691 13:70748889-70762990   CU633217,CH242-142C18,13:70727849-70789395
(Clone quality: bE142C18 on chr=13; Num_of_Contigs=4; )
PLTP ENSSSCG00000007434 17:50215735-50222549   CU407252,CH242-441N18,17:50215714-50222576
(Clone quality: bE441N18 on chr=17; Num_of_Contigs=7; )
PLUNC ENSSSCG00000007260 17:38674719-38681769   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
PLXDC1   ENSSSCG00000017511 12:21113802-21174151    
PLXDC2   ENSSSCG00000011091 10:51791279-52121327    
PLXNA2   ENSSSCG00000015621 9:126926727-127037639   CU856391,CH242-362M22,9:126866901-127037893
(Clone quality: bE362M22 on chr=9; Num_of_Contigs=3; )
PLXNA4   ENSSSCG00000016547 18:14913273-14914460   CU469309,CH242-313B7,18:14912201-14916504
(Clone quality: bE313B7 on chr=18; Num_of_Contigs=16; )
PLXNB1 ENSSSCG00000011346 13:25916679-25938329    
PLXNC1 ENSSSCG00000000907 5:83803502-83940444    
PLXND1   ENSSSCG00000011592 13:57439347-57489073    
PM20D2   ENSSSCG00000004314 1:59959287-59985402   CU075926,CH242-86H13,1:59921397-60144581
(Clone quality: bE86H13 on chr=1; Num_of_Contigs=1; )
PMCH ENSSSCG00000000858 5:77325181-77325441   CU457436,CH242-54N2,5:77321248-77325842
(Clone quality: bE54N2 on chr=5; Num_of_Contigs=8; )
PMEPA1   ENSSSCG00000007509 17:60601351-60655822 CR956367,PigE-122C21,17:60551850-60674969
(No clone quality info on bT122C21) 		 
PMF1   ENSSSCG00000006493 4:97756474-97782681    
PMFBP1   ENSSSCG00000002747 6:10728037-10755444    
PML ENSSSCG00000000282 5:17804056-17815030    
PML ENSSSCG00000001509 7:34084220-34087457 CU607018,CH242-138E20,7:33930957-34116846
(Clone quality: bE138E20 on chr=7; Num_of_Contigs=1; ) 		 
PML ENSSSCG00000001912 7:64835208-64876558    
PML ENSSSCG00000006033 4:29305063-29347624    
PML ENSSSCG00000006760 4:110919445-110948658   CU138563,CH242-230I15,4:110770286-110949832
(Clone quality: bE230I15 on chr=4; Num_of_Contigs=2; )
PML ENSSSCG00000007667 3:6832679-6836677   CU928563,CH242-369L8,3:6786261-6837493
(Clone quality: bE369L8 on chr=3; Num_of_Contigs=1; )
PML ENSSSCG00000009299 11:3165368-3174969   CU633808,CH242-519P8,11:3156619-3186937
(Clone quality: bE519P8 on chr=11; Num_of_Contigs=11; )
PML ENSSSCG00000010235 14:74220079-74245927   CT997807,CH242-507P18,14:74104999-74249590
(Clone quality: bE507P18 on chr=14; Num_of_Contigs=4; )
PML ENSSSCG00000010587 14:118662408-118675520   CT971490,CH242-33G15,14:118660960-118687883
(Clone quality: bE33G15 on chr=14; Num_of_Contigs=9; )
PMM1   ENSSSCG00000000061 5:3510467-3521513    
PMP2   ENSSSCG00000006152 4:56634430-56639963   CU179652,CH242-259L11,4:56618115-56800213
(Clone quality: bE259L11 on chr=4; Num_of_Contigs=1; )
PMPCB   ENSSSCG00000015422 9:96358618-96372084   CU570825,CH242-232P7,9:96290209-96447239
(Clone quality: bE232P7 on chr=9; Num_of_Contigs=1; )
PMS1   ENSSSCG00000016045 15:88917303-89006719    
PMS2 ENSSSCG00000007590 3:4068724-4094386    
PMVK   ENSSSCG00000006535 4:98857618-98869439    
PNCK   ENSSSCG00000012773 X:122519890-122522698   FP245398,CH242-390A7,X:122519885-122526389
(Clone quality: bE390A7 on chr=X; Num_of_Contigs=13; )
PNKD   ENSSSCG00000016188 15:113524542-113526622   CU550681,CH242-392C2,15:113522054-113526809
(Clone quality: bE392C2 on chr=15; Num_of_Contigs=23; )
PNKP   ENSSSCG00000003195 6:38486342-38492934    
PNLDC1   ENSSSCG00000004046 1:8687881-8706454    
PNLIPRP1   ENSSSCG00000010659 14:132614445-132629698   CU633249,CH242-237J21,14:132606680-132662168
(Clone quality: bE237J21 on chr=14; Num_of_Contigs=12; )
PNLIPRP3   ENSSSCG00000010657 14:132438131-132459278   CU469112,CH242-267E6,14:132437696-132531232
(Clone quality: bE267E6 on chr=14; Num_of_Contigs=5; )
PNMA1   ENSSSCG00000002346 7:104942037-104943098   CT943655,CH242-523I15,7:104924151-105020426
(Clone quality: bE523I15 on chr=7; Num_of_Contigs=3; )
PNMA2   ENSSSCG00000009659 14:10565128-10566222   CU468375,CH242-98K7,14:10562483-10595341
(Clone quality: bE98K7 on chr=14; Num_of_Contigs=4; )
PNMAL1   ENSSSCG00000003102 6:36290296-36291603   FP102354,CH242-94J5,6:36287686-36300933
(Clone quality: bE94J5 on chr=6; Num_of_Contigs=21; )
PNMT   ENSSSCG00000017501 12:20618539-20620121   CU640399,CH242-251F23,12:20578579-20644206
(Clone quality: bE251F23 on chr=12; Num_of_Contigs=5; )
PNO1   ENSSSCG00000008352 3:68100638-68113853   CU915705,CH242-440I14,3:68081039-68131854
(Clone quality: bE440I14 on chr=3; Num_of_Contigs=1; )
PNOC ENSSSCG00000009675 14:12085566-12116891   CT737320,CH242-198J10,14:11977333-12124098
(Clone quality: bE198J10 on chr=14; Num_of_Contigs=2; )
PNPLA1   ENSSSCG00000001559 7:36617836-36688890    
PNPLA2   ENSSSCG00000012841 2:148626-153498   CU928976,CH242-144M19,2:43742-170991
(Clone quality: bE144M19 on chr=2; Num_of_Contigs=17; )
PNPLA4   ENSSSCG00000012100 X:3428814-3458822 CU694849,CH242-236E18,X:3326006-3459219
(Clone quality: bE236E18 on chr=X; Num_of_Contigs=4; ) 		 
PNPLA6   ENSSSCG00000013572 2:50955871-50984485    
PNPLA8   ENSSSCG00000015446 9:101139895-101164070    
PNPO ENSSSCG00000017523 12:21640003-21643502    
PNPT1   ENSSSCG00000008399 3:79568667-79591438    
PNRC1 ENSSSCG00000004312 1:59901989-59902531   CU469321,CH242-187O16,1:59900218-59902721
(Clone quality: bE187O16 on chr=1; Num_of_Contigs=20; )
PODNL1   ENSSSCG00000013762 2:56934034-56939022   FP016000,CH242-10C10,2:56824783-56952713
(Clone quality: bE10C10 on chr=2; Num_of_Contigs=2; )
PODXL ENSSSCG00000016548 18:15635640-15642260   CU914675,CH242-449K18,18:15606063-15666559
(Clone quality: bE449K18 on chr=18; Num_of_Contigs=3; )
POF1B   ENSSSCG00000012462 X:67506761-67616334    
POFUT1   ENSSSCG00000007244 17:37836533-37860865   CU928633,CH242-263B18,17:37807325-37865251
(Clone quality: bE263B18 on chr=17; Num_of_Contigs=9; )
POFUT2   ENSSSCG00000012088 13:145118424-145125297   CU466368,CH242-15J19,13:145117921-145126074
(Clone quality: bE15J19 on chr=13; Num_of_Contigs=15; )
POGK   ENSSSCG00000006319 4:87559362-87563286   CU207249,CH242-383G23,4:87517520-87566826
(Clone quality: bE383G23 on chr=4; Num_of_Contigs=5; )
POGZ   ENSSSCG00000006622 4:101750743-101785498 CU179724,CH242-246E20,4:101737894-101911024
(Clone quality: bE246E20 on chr=4; Num_of_Contigs=5; ) 		 
POLA1   ENSSSCG00000012184 X:19639405-19669606    
POLA2   ENSSSCG00000012997 2:5322633-5349964   CU856029,CH242-276E8,2:5308192-5352105
(Clone quality: bE276E8 on chr=2; Num_of_Contigs=9; )
POLB   ENSSSCG00000007031 17:11843524-11865707    
POLD1   ENSSSCG00000003216 6:39000770-39015171   FP102476,CH242-133P5,6:39000388-39018494
(Clone quality: bE133P5 on chr=6; Num_of_Contigs=12; )
POLD2   ENSSSCG00000016753 18:49580749-49589221   CU928907,CH242-155A21,18:49534481-49598883
(Clone quality: bE155A21 on chr=18; Num_of_Contigs=2; )
POLD3   ENSSSCG00000014842 9:8594841-8646291    
POLD4   ENSSSCG00000012916 2:3562263-3564074   CU914251,CH242-230J11,2:3561382-3573634
(Clone quality: bE230J11 on chr=2; Num_of_Contigs=8; )
POLDIP3   ENSSSCG00000000039 5:2874787-2886770    
POLE2   ENSSSCG00000005008 1:187911288-187945836    
POLE3   ENSSSCG00000005478 1:266802421-266804033   FP102008,CH242-508O3,1:266799704-266845426
(Clone quality: bE508O3 on chr=1; Num_of_Contigs=5; )
POLG ENSSSCG00000001838 7:60289662-60306310   CT943647,CH242-241C8,7:60283200-60330098
(Clone quality: bE241C8 on chr=7; Num_of_Contigs=2; )
POLH   ENSSSCG00000001683 7:44742693-44773503   CU928765,CH242-349L1,7:44716402-44811319
(Clone quality: bE349L1 on chr=7; Num_of_Contigs=5; )
POLI   ENSSSCG00000004529 1:106651863-106677716   CU694517,CH242-313D11,1:106640135-106799320
(Clone quality: bE313D11 on chr=1; Num_of_Contigs=2; )
POLK   ENSSSCG00000014082 2:73394857-73471120    
POLL ENSSSCG00000010564 14:117472402-117480990   CT737224,CH242-8E16,14:117416776-117558707
(Clone quality: bE8E16 on chr=14; Num_of_Contigs=1; )
POLM ENSSSCG00000016755 18:49621968-49631257   CU928907,CH242-155A21,18:49598984-49712156
(Clone quality: bE155A21 on chr=18; Num_of_Contigs=2; )
POLN   ENSSSCG00000008684 8:407443-534569    
POLR1A   ENSSSCG00000008226 3:53578822-53658397   CU570839,CH242-286N20,3:53540211-53717808
(Clone quality: bE286N20 on chr=3; Num_of_Contigs=1; )
POLR1B   ENSSSCG00000008098 3:39400354-39423641    
POLR1D   ENSSSCG00000009310 11:4483943-4485604   CU633812,CH242-189K13,11:4472289-4485851
(Clone quality: bE189K13 on chr=11; Num_of_Contigs=14; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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