A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 8901 - 9000:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
PIP4K2C   ENSSSCG00000000436 5:21698703-21709799   CU896550,CH242-139E23,5:21693100-21710229
(Clone quality: bE139E23 on chr=5; Num_of_Contigs=9; )
PIP5K1C   ENSSSCG00000013490 2:48179661-48362695    
PIP5K2A   ENSSSCG00000011079 10:49742656-49925739    
PIP5KL1   ENSSSCG00000005629 1:282896657-282900139   CU638853,CH242-308I15,1:282840723-282900792
(Clone quality: bE308I15 on chr=1; Num_of_Contigs=4; )
PIPOX   ENSSSCG00000017781 12:42986321-42999160   CU856290,CH242-166L10,12:42944694-43045711
(Clone quality: bE166L10 on chr=12; Num_of_Contigs=5; )
PIR   ENSSSCG00000012136 X:11204005-11301184    
PISD   ENSSSCG00000010032 14:49189135-49226777    
PITPNB   ENSSSCG00000009967 14:45775702-45838506   CT990610,CH242-129E1,14:45739276-45849595
(Clone quality: bE129E1 on chr=14; Num_of_Contigs=4; )
PITPNC1   ENSSSCG00000017274 12:11749168-12020183    
PITPNM1   ENSSSCG00000012903 2:3411264-3423542   CU633429,CH242-6G2,2:3403551-3456026
(Clone quality: bE6G2 on chr=2; Num_of_Contigs=8; )
PITPNM2   ENSSSCG00000009781 14:29870515-29958520    
PITRM1   ENSSSCG00000011157 10:63284254-63301383    
PITX2 ENSSSCG00000009131 8:95915280-95917240    
PITX3   ENSSSCG00000010578 14:118212599-118214207   CU407032,CH242-176B16,14:118180747-118362423
(Clone quality: bE176B16 on chr=14; Num_of_Contigs=3; )
PIWIL1   ENSSSCG00000009749 14:24814875-24841510    
PIWIL4   ENSSSCG00000014959 9:27041966-27089566    
PK4P ENSSSCG00000015878 15:61058427-61119399    
PKD1 ENSSSCG00000008041 3:36451941-36500695    
PKD1L3   ENSSSCG00000002744 6:10651542-10683261    
PKD2   ENSSSCG00000009217 8:112520831-112574248    
PKD2L1   ENSSSCG00000010552 14:116267783-116303215   CT827831,CH242-224L12,14:116263324-116390345
(Clone quality: bE224L12 on chr=14; Num_of_Contigs=2; )
PKDREJ   ENSSSCG00000000004 5:115309-121710   FP016092,CH242-185O3,5:114996-122369
(Clone quality: bE185O3 on chr=5; Num_of_Contigs=8; )
PKHD1 ENSSSCG00000001746 7:52966007-53029118    
PKHD1 ENSSSCG00000006025 4:27723083-27918235    
PKHD1L1   ENSSSCG00000006025 4:27723083-27918235    
PKIA ENSSSCG00000006163 4:59928788-60032301    
PKIB   ENSSSCG00000004236 1:41415699-41446444    
PKM2   ENSSSCG00000001930 7:66373822-66399229   CU468866,CH242-150C14,7:66357007-66467327
(Clone quality: bE150C14 on chr=7; Num_of_Contigs=3; )
PKN1   ENSSSCG00000013783 2:57306942-57311220   FP103015,CH242-135B13,2:57305111-57311746
(Clone quality: bE135B13 on chr=2; Num_of_Contigs=14; )
PKN2   ENSSSCG00000006927 4:132238495-132316018   CU179630,CH242-295H8,4:132189179-132328462
(Clone quality: bE295H8 on chr=4; Num_of_Contigs=2; )
PKN3   ENSSSCG00000005657 1:283750917-283762816   FP236218,CH242-328B23,1:283737933-283763718
(Clone quality: bE328B23 on chr=1; Num_of_Contigs=4; )
PKNOX2   ENSSSCG00000015211 9:51037411-51079261    
PKP2   ENSSSCG00000000528 5:40611156-40675368    
PLA2G12A   ENSSSCG00000009139 8:96645687-96674838   CU694741,CH242-514C2,8:96640360-96675254
(Clone quality: bE514C2 on chr=8; Num_of_Contigs=10; )
PLA2G12B ENSSSCG00000010291 14:78985086-79009484   FP085541,CH242-456C24,14:78979366-79114663
(Clone quality: bE456C24 on chr=14; Num_of_Contigs=9; )
PLA2G15   ENSSSCG00000002765 6:12760583-12832697    
PLA2G16   ENSSSCG00000013055 2:6945295-6973514    
PLA2G2A ENSSSCG00000003494 6:53636266-53675696    
PLA2G2C   ENSSSCG00000003499 6:53921844-53935382   FP236206,CH242-163P14,6:53892728-53945570
(Clone quality: bE163P14 on chr=6; Num_of_Contigs=3; )
PLA2G2D ENSSSCG00000003497 6:53777540-53783773   FP236206,CH242-163P14,6:53760845-53819235
(Clone quality: bE163P14 on chr=6; Num_of_Contigs=3; )
PLA2G2F   ENSSSCG00000003496 6:53752629-53760405   FP236206,CH242-163P14,6:53749626-53760744
(Clone quality: bE163P14 on chr=6; Num_of_Contigs=3; )
PLA2G4D   ENSSSCG00000004733 1:135513552-135517262   CU041383,CH242-91E9,1:135507220-135568656
(Clone quality: bE91E9 on chr=1; Num_of_Contigs=12; )
PLA2G4E   ENSSSCG00000004734 1:135687454-135706137   CU466957,CH242-240E5,1:135679779-135749270
(Clone quality: bE240E5 on chr=1; Num_of_Contigs=7; )
PLA2G4F   ENSSSCG00000004732 1:135452739-135464565    
PLA2G6 ENSSSCG00000000110 5:6230165-6283395   FP102898,CH242-409K2,5:6224754-6284089
(Clone quality: bE409K2 on chr=5; Num_of_Contigs=6; )
PLA2G7 ENSSSCG00000001723 7:48889662-48932973    
PLA2R1 ENSSSCG00000015885 15:62251443-62310921    
PLAA ENSSSCG00000005126 1:205417486-205460665    
PLAC1   ENSSSCG00000012684 X:108514833-108515351   CU639462,CH242-164F18,X:108497189-108549869
(Clone quality: bE164F18 on chr=X; Num_of_Contigs=3; )
PLAC8 ENSSSCG00000009240 8:116364509-116392802   CU694671,CH242-135K3,8:116354156-116447271
(Clone quality: bE135K3 on chr=8; Num_of_Contigs=3; )
PLAC8 ENSSSCG00000014408 2:133565168-133589118   CU928414,CH242-495G3,2:133557524-133651075
(Clone quality: bE495G3 on chr=2; Num_of_Contigs=5; )
PLAC8L1   ENSSSCG00000014408 2:133565168-133589118   CU928414,CH242-495G3,2:133557524-133651075
(Clone quality: bE495G3 on chr=2; Num_of_Contigs=5; )
PLAC9   ENSSSCG00000010332 14:85349904-85361121   CU468437,CH242-56P17,14:85319973-85443215
(Clone quality: bE56P17 on chr=14; Num_of_Contigs=3; )
PLAG1   ENSSSCG00000006247 4:78584050-78586044   CU407092,CH242-518H24,4:78579444-78680435
(Clone quality: bE518H24 on chr=4; Num_of_Contigs=5; )
PLAGL2 ENSSSCG00000007243 17:37824498-37836421   CU928633,CH242-263B18,17:37807325-37865251
(Clone quality: bE263B18 on chr=17; Num_of_Contigs=9; )
PLAT ENSSSCG00000007032 17:11916833-11945174    
PLAU ENSSSCG00000010312 14:79931353-79937213   CU640439,CH242-168L21,14:79906302-80025524
(Clone quality: bE168L21 on chr=14; Num_of_Contigs=4; )
PLAUR ENSSSCG00000003044 6:34639079-34644403   FP015926,CH242-183C8,6:34614693-34644455
(Clone quality: bE183C8 on chr=6; Num_of_Contigs=15; )
PLAUR ENSSSCG00000003062 6:35027946-35031408   FP102604,CH242-184P4,6:34968039-35068842
(No clone quality info on )
PLAUR ENSSSCG00000003065 6:35092325-35107861    
PLAUR ENSSSCG00000003073 6:35350245-35354566    
PLAUR ENSSSCG00000015676 15:7491968-7513669   CU915310,CH242-174H6,15:7457917-7555553
(Clone quality: bE174H6 on chr=15; Num_of_Contigs=3; )
PLB1   ENSSSCG00000008541 3:103554744-103573515   CU468182,CH242-232K9,3:103548566-103606520
(Clone quality: bE232K9 on chr=3; Num_of_Contigs=4; )
PLBD2   ENSSSCG00000009872 14:38872267-38898613    
PLCB1   ENSSSCG00000007056 17:17191557-17361321    
PLCB2   ENSSSCG00000004779 1:137533797-137544390   CU498975,CH242-47C7,1:137533368-137545560
(Clone quality: bE47C7 on chr=1; Num_of_Contigs=13; )
PLCB3 ENSSSCG00000013034 2:6230671-6243362    
PLCB4   ENSSSCG00000007058 17:18084144-18284816    
PLCD3   ENSSSCG00000017338 12:16148233-16168914    
PLCD4 ENSSSCG00000016192 15:113591768-113619299   CU570813,CH242-128B23,15:113581621-113657451
(Clone quality: bE128B23 on chr=15; Num_of_Contigs=4; )
PLCE1   ENSSSCG00000010483 14:110861592-111099030    
PLCG1 ENSSSCG00000007356 17:45881829-45914905    
PLCG2 ENSSSCG00000002688 6:4701218-4815136    
PLCL1   ENSSSCG00000016083 15:95398577-95423950   FP015776,CH242-348I23,15:95320310-95433055
(Clone quality: bE348I23 on chr=15; Num_of_Contigs=1; )
PLCXD2   ENSSSCG00000011934 13:111527747-111527929   CU550693,CH242-88C11,13:111522590-111542052
(Clone quality: bE88C11 on chr=13; Num_of_Contigs=23; )
PLCXD3   ENSSSCG00000016862 16:23553381-23555818   CU570718,CH242-195L1,16:23528300-23606648
(Clone quality: bE195L1 on chr=16; Num_of_Contigs=5; )
PLCZ ENSSSCG00000000590 5:51990478-52034702    
PLCZ1 ENSSSCG00000000590 5:51990478-52034702    
PLD1 ENSSSCG00000011750 13:83588488-83687204    
PLD2   ENSSSCG00000017912 12:49271043-49281709   CU929524,CH242-164N17,12:49266035-49282374
(Clone quality: bE164N17 on chr=12; Num_of_Contigs=22; )
PLD4   ENSSSCG00000002554 7:133126052-133133061   CU695123,CH242-103I13,7:133119554-133156545
(Clone quality: bE103I13 on chr=7; Num_of_Contigs=13; )
PLDN ENSSSCG00000004667 1:131763860-131769732   CU012064,CH242-22G24,1:131760641-131808567
(Clone quality: bE22G24 on chr=1; Num_of_Contigs=4; )
PLEK ENSSSCG00000008348 3:67854564-67881271    
PLEK2   ENSSSCG00000002290 7:99518891-99541547   CT967298,CH242-176H11,7:99387011-99569801
(Clone quality: bE176H11 on chr=7; Num_of_Contigs=1; )
PLEKHA1   ENSSSCG00000010702 14:138385176-138438885   CU469121,CH242-146A14,14:138306093-138465519
(Clone quality: bE146A14 on chr=14; Num_of_Contigs=3; )
PLEKHA2   ENSSSCG00000015811 15:44991886-45044229    
PLEKHA4   ENSSSCG00000003137 6:37541633-37567093    
PLEKHA5   ENSSSCG00000000588 5:51518327-51661551    
PLEKHA6   ENSSSCG00000015281 9:62455617-62516782    
PLEKHA7   ENSSSCG00000013382 2:39577038-39651269    
PLEKHB1   ENSSSCG00000014827 9:7748335-7761706   CU638671,CH242-188E8,9:7745474-7773512
(Clone quality: bE188E8 on chr=9; Num_of_Contigs=8; )
PLEKHC1 ENSSSCG00000005042 1:191030327-191069893    
PLEKHF1   ENSSSCG00000002852 6:26868342-26869193   FP102582,CH242-162B21,6:26864207-26872823
(Clone quality: bE162B21 on chr=6; Num_of_Contigs=12; )
PLEKHG2 ENSSSCG00000010709 14:138683137-138691683    
PLEKHG3   ENSSSCG00000002276 7:97245534-97291922    
PLEKHG4   ENSSSCG00000002782 6:13282306-13290479   CU929920,CH242-351A16,6:13258514-13336829
(Clone quality: bE351A16 on chr=6; Num_of_Contigs=8; )
PLEKHG5   ENSSSCG00000003376 6:45683446-45694193   FP102449,CH242-60I1,6:45665679-45695205
(Clone quality: bE60I1 on chr=6; Num_of_Contigs=6; )
PLEKHG6   ENSSSCG00000000709 5:60350626-60367494    
PLEKHH1   ENSSSCG00000002292 7:99678445-99710443    
PLEKHH2 ENSSSCG00000008456 3:90049914-90079122    
Go to records:
1-100

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team