A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 3201 - 3300:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
CTF1 ENSSSCG00000007774 3:16040475-16044704   FP102303,CH242-232B18,3:16040061-16090011
(Clone quality: bE232B18 on chr=3; Num_of_Contigs=7; )
CTF2 ENSSSCG00000008493 3:96014184-96038392   CU695023,CH242-129E17,3:96011217-96129629
(Clone quality: bE129E17 on chr=3; Num_of_Contigs=2; )
CTGF ENSSSCG00000004192 1:33154716-33157154   CU468353,CH242-395K18,1:33152740-33201967
(Clone quality: bE395K18 on chr=1; Num_of_Contigs=5; )
CTGF ENSSSCG00000007379 17:48922466-48936758   FP236540,CH242-206B16,17:48921895-48938133
(Clone quality: bE206B16 on chr=17; Num_of_Contigs=10; )
CTH   ENSSSCG00000003789 6:100213217-100244856    
CTHRC1   ENSSSCG00000006051 4:34133414-34150470    
CTL1 ENSSSCG00000005425 1:258582618-258743259    
CTLA4 ENSSSCG00000016122 15:100704141-100709270    
CTNNA1 ENSSSCG00000014339 2:127747557-127840081    
CTNNA2 ENSSSCG00000008250 3:57482883-57597557    
CTNNA3 ENSSSCG00000010230 14:72322151-73160656    
CTNNAL1 ENSSSCG00000005443 1:262760613-262814114    
CTNNB1 ENSSSCG00000011274 13:20905977-20950024   CU861524,CH242-156J19,13:20905383-20993819
(Clone quality: bE156J19 on chr=13; Num_of_Contigs=6; )
CTNNB1 ENSSSCG00000015386 9:85935030-85951631   FP102348,CH242-188H10,9:85931672-85957896
(Clone quality: bE188H10 on chr=9; Num_of_Contigs=13; )
CTNNBL1 ENSSSCG00000007337 17:43302744-43347401    
CTNND1 ENSSSCG00000013174 2:11163152-11188015   CU464011,CH242-383N23,2:11069163-11208431
(Clone quality: bE383N23 on chr=2; Num_of_Contigs=2; )
CTNND2 ENSSSCG00000016780 16:218938-583660    
CTNS   ENSSSCG00000017865 12:47026848-47046510    
CTPS   ENSSSCG00000003973 6:121597240-121628289   FP016067,CH242-126M8,6:121551012-121676967
(Clone quality: bE126M8 on chr=6; Num_of_Contigs=2; )
CTPS2   ENSSSCG00000012146 X:12510127-12660153    
CTR9   ENSSSCG00000013406 2:45192141-45220403    
CTSA ENSSSCG00000007431 17:50146758-50153335    
CTSC ENSSSCG00000014924 9:21822223-21856922   CU855751,CH242-343O24,9:21819212-21862877
(Clone quality: bE343O24 on chr=9; Num_of_Contigs=3; )
CTSG ENSSSCG00000001980 7:81140765-81143404   CT997804,CH242-280B15,7:81125347-81169003
(Clone quality: bE280B15 on chr=7; Num_of_Contigs=5; )
CTSH ENSSSCG00000001770 7:54119425-54140625   CU326382,CH242-204O9,7:54055646-54191837
(Clone quality: bE204O9 on chr=7; Num_of_Contigs=8; )
CTSK ENSSSCG00000006647 4:102342678-102354617   CU463875,CH242-217B6,4:102327469-102356902
(Clone quality: bE217B6 on chr=4; Num_of_Contigs=12; )
CTSO ENSSSCG00000008867 8:38712697-38725139   CU855637,CH242-199L13,8:38712595-38842897
(Clone quality: bE199L13 on chr=8; Num_of_Contigs=2; )
CTSS ENSSSCG00000006648 4:102368163-102393283   CU655899,CH242-160A10,4:102356903-102440553
(Clone quality: bE160A10 on chr=4; Num_of_Contigs=7; )
CTSW ENSSSCG00000012970 2:4823483-4827562   CU928325,CH242-208C18,2:4805866-4836669
(Clone quality: bE208C18 on chr=2; Num_of_Contigs=5; )
CTSZ ENSSSCG00000007522 17:61758359-61766242 CR956646,CH242-247L10,17:61655968-61825296
(No clone quality info on bE247L10) 		 
CTTN ENSSSCG00000012867 2:1431275-1461457    
CTTNBP2   ENSSSCG00000016625 18:26939682-27027568   CU914299,CH242-83K4,18:26927247-27039940
(Clone quality: bE83K4 on chr=18; Num_of_Contigs=6; )
CTTNBP2NL   ENSSSCG00000006781 4:112411893-112454113    
CTXN1   ENSSSCG00000013590 2:51296669-51296917   CU929699,CH242-182L23,2:51289316-51437705
(Clone quality: bE182L23 on chr=2; Num_of_Contigs=2; )
CTXN2   ENSSSCG00000004660 1:128876836-128877078   CU407256,CH242-454M16,1:128845613-128904942
(Clone quality: bE454M16 on chr=1; Num_of_Contigs=8; )
CTXN3   ENSSSCG00000014253 2:118225224-118225466   CU928767,CH242-12C1,2:118127977-118261112
(Clone quality: bE12C1 on chr=2; Num_of_Contigs=2; )
CUBN   ENSSSCG00000011030 10:41344608-41499207    
CUEDC2   ENSSSCG00000010583 14:118463701-118465668   CU498828,CH242-221N13,14:118461285-118465722
(Clone quality: bE221N13 on chr=14; Num_of_Contigs=8; )
CUGBP1   ENSSSCG00000013233 2:13144668-13159069   CU856103,CH242-271O6,2:13144139-13162730
(Clone quality: bE271O6 on chr=2; Num_of_Contigs=3; )
CUGBP2   ENSSSCG00000011121 10:57573759-57728826    
CUL1 ENSSSCG00000015455 9:102080685-102096150   CU915471,CH242-253I6,9:102066088-102097050
(Clone quality: bE253I6 on chr=9; Num_of_Contigs=8; )
CUL2 ENSSSCG00000005659 1:283774905-283798601    
CUL2 ENSSSCG00000011104 10:54618727-54663918   CU914378,CH242-203J15,10:54614213-54709501
(Clone quality: bE203J15 on chr=10; Num_of_Contigs=5; )
CUL3 ENSSSCG00000010931 10:24955012-24986671   CU986276,CH242-319L9,10:24954126-25023165
(Clone quality: bE319L9 on chr=10; Num_of_Contigs=6; )
CUL3 ENSSSCG00000016234 15:118519504-118764756    
CUL4A ENSSSCG00000009556 11:78839790-78871059   FP236214,CH242-266L11,11:78807891-78889241
(Clone quality: bE266L11 on chr=11; Num_of_Contigs=10; )
CUL4B ENSSSCG00000012603 X:95743380-95781252    
CUL7   ENSSSCG00000001657 7:43944828-43961710    
CUTA   ENSSSCG00000001512 7:34127466-34129092 CU498854,CH242-216B14,7:34116847-34138577
(Clone quality: bE216B14 on chr=7; Num_of_Contigs=6; ) 		 
CUTC   ENSSSCG00000010542 14:115656295-115681889   CT868685,CH242-211E15,14:115597313-115736638
(Clone quality: bE211E15 on chr=14; Num_of_Contigs=2; )
CUX1   ENSSSCG00000007681 3:7733351-8215757    
CUX2   ENSSSCG00000009831 14:32589939-32635021   CT737261,CH242-157F24,14:32468838-32654912
(Clone quality: bE157F24 on chr=14; Num_of_Contigs=1; )
CWC15   ENSSSCG00000014961 9:27373590-27384894   CU571278,CH242-203H23,9:27341017-27403279
(Clone quality: bE203H23 on chr=9; Num_of_Contigs=4; )
CWF19L1   ENSSSCG00000010550 14:116223704-116256112   CT827831,CH242-224L12,14:116210864-116263223
(Clone quality: bE224L12 on chr=14; Num_of_Contigs=2; )
CWF19L2   ENSSSCG00000015264 9:60317624-60320710   CU929969,CH242-7J8,9:60311833-60333001
(Clone quality: bE7J8 on chr=9; Num_of_Contigs=6; )
CWH43   ENSSSCG00000008830 8:33355438-33509155    
CXADR ENSSSCG00000012012 13:131074034-131090971   CU606918,CH242-163L22,13:131072906-131111271
(Clone quality: bE163L22 on chr=13; Num_of_Contigs=12; )
CXADR ENSSSCG00000015089 9:44392087-44420224    
CXCL10 ENSSSCG00000008977 8:61077900-61080208   CU862040,CH242-216J5,8:61077509-61088713
(Clone quality: bE216J5 on chr=8; Num_of_Contigs=10; )
CXCL11 ENSSSCG00000008978 8:61134507-61135728   CU862040,CH242-216J5,8:61126872-61178932
(Clone quality: bE216J5 on chr=8; Num_of_Contigs=10; )
CXCL12 ENSSSCG00000010414 14:95912350-95927577    
CXCL14 ENSSSCG00000014310 2:125189121-125198252   CU914284,CH242-458M20,2:125164155-125314737
(Clone quality: bE458M20 on chr=2; Num_of_Contigs=2; )
CXCL16 ENSSSCG00000017920 12:49355045-49359301   CU929524,CH242-164N17,12:49336210-49359359
(Clone quality: bE164N17 on chr=12; Num_of_Contigs=22; )
CXCL17 ENSSSCG00000003048 6:34715572-34728644    
CXCL2 ENSSSCG00000008959 8:59528574-59530500   CU928337,CH242-266F15,8:59527661-59536650
(Clone quality: bE266F15 on chr=8; Num_of_Contigs=10; )
CXCL9 ENSSSCG00000008975 8:61049137-61054194   CU672252,CH242-392J2,8:61030020-61058295
(Clone quality: bE392J2 on chr=8; Num_of_Contigs=2; )
CXCR3 ENSSSCG00000012402 X:57213490-57216859   FP015848,CH242-94E16,X:57182938-57245160
(Clone quality: bE94E16 on chr=X; Num_of_Contigs=6; )
CXCR4 ENSSSCG00000015688 15:14081271-14084327    
CXCR5 ENSSSCG00000015098 9:44724736-44735301   FP089499,CH242-36G7,9:44609302-44750256
(Clone quality: bE36G7 on chr=9; Num_of_Contigs=3; )
CXCR5 ENSSSCG00000015098 9:44724736-44735301   FP089499,CH242-36G7,9:44609302-44750256
(Clone quality: bE36G7 on chr=9; Num_of_Contigs=3; )
CXCR6 ENSSSCG00000011318 13:24506685-24511451   CU469254,CH242-75A24,13:24398824-24519472
(Clone quality: bE75A24 on chr=13; Num_of_Contigs=4; )
CXCR6 ENSSSCG00000011318 13:24506685-24511451   CU469254,CH242-75A24,13:24398824-24519472
(Clone quality: bE75A24 on chr=13; Num_of_Contigs=4; )
CXCR7 ENSSSCG00000016322 15:128776144-128777232   CU929109,CH242-312D3,15:128751699-128807860
(Clone quality: bE312D3 on chr=15; Num_of_Contigs=8; )
CXorf21   ENSSSCG00000012201 X:25791423-25792322 CU210922,CH242-479E6,X:25682979-25864194
(Clone quality: bE479E6 on chr=X; Num_of_Contigs=1; ) 		 
CXorf22   ENSSSCG00000012219 X:31509339-31545878    
CXorf26   ENSSSCG00000012429 X:60225399-60228940    
CXorf27   ENSSSCG00000012231 X:33344116-33344457 CU695110,CH242-281O17,X:33271124-33401329
(Clone quality: bE281O17 on chr=X; Num_of_Contigs=4; ) 		 
CXorf36   ENSSSCG00000012263 X:40288991-40289236   FP102177,CH242-210O3,X:40287967-40291040
(Clone quality: bE210O3 on chr=X; Num_of_Contigs=23; )
CXorf38   ENSSSCG00000012249 X:36046286-36065965    
CXorf39   ENSSSCG00000012542 X:82748675-82771454    
CXorf40A   ENSSSCG00000012737 X:120049493-120050886   FP102033,CH242-101J9,X:120045833-120065226
(Clone quality: bE101J9 on chr=X; Num_of_Contigs=8; )
CXorf41   ENSSSCG00000012558 X:85791716-85829214    
CXorf48   ENSSSCG00000012693 X:109070761-109087685   CU928850,CH242-30L9,X:109056727-109092602
(Clone quality: bE30L9 on chr=X; Num_of_Contigs=6; )
CXorf56   ENSSSCG00000012622 X:96639705-96650622    
CXorf57 ENSSSCG00000012549 X:84944696-84958351    
CXORF57 ENSSSCG00000012549 X:84944696-84958351    
CXorf58   ENSSSCG00000012175 X:18858499-18888878    
CXORF6 ENSSSCG00000012741 X:120339479-120389000   FP102038,CH242-116A16,X:120329164-120398795
(Clone quality: bE116A16 on chr=X; Num_of_Contigs=5; )
CXorf64   ENSSSCG00000012647 X:101410509-101412337   FP102440,CH242-251N15,X:101407809-101423016
(Clone quality: bE251N15 on chr=X; Num_of_Contigs=13; )
CXorf65   ENSSSCG00000012398 X:56857854-56859680   CU468205,CH242-6A14,X:56849541-56908124
(Clone quality: bE6A14 on chr=X; Num_of_Contigs=4; )
CXorf66   ENSSSCG00000012714 X:112553305-112677871    
CXorf67   ENSSSCG00000012316 X:44379404-44381686   FP102067,CH242-300C18,X:44377037-44405705
(Clone quality: bE300C18 on chr=X; Num_of_Contigs=4; )
CXXC1   ENSSSCG00000004517 1:102963474-102968962   CU914451,CH242-152J17,1:102889373-103019647
(Clone quality: bE152J17 on chr=1; Num_of_Contigs=3; )
CXXC4   ENSSSCG00000009159 8:100648256-100649130   CU928701,CH242-400B5,8:100647554-100668664
(Clone quality: bE400B5 on chr=8; Num_of_Contigs=9; )
CXXC5   ENSSSCG00000014357 2:128559980-128562712   CU928373,CH242-379D14,2:128553450-128585205
(Clone quality: bE379D14 on chr=2; Num_of_Contigs=17; )
CXYorf3 ENSSSCG00000012627 X:96844445-96851850    
CYB561   ENSSSCG00000017297 12:13021772-13031579    
CYB561D1   ENSSSCG00000006827 4:115149515-115151413   CU633714,CH242-413N19,4:115147581-115211057
(Clone quality: bE413N19 on chr=4; Num_of_Contigs=4; )
CYB561D2   ENSSSCG00000011410 13:27494842-27497381   CU861907,CH242-10C8,13:27490820-27610755
(Clone quality: bE10C8 on chr=13; Num_of_Contigs=3; )
CYB5A   ENSSSCG00000004875 1:157181946-157217542   CU571232,CH242-48P10,1:157151362-157292527
(Clone quality: bE48P10 on chr=1; Num_of_Contigs=3; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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