A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 24701 - 24800:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
Q95306_PIG   ENSSSCG00000004256 1:46541654-46549790   CU407254,CH242-450A14,1:46540392-46557801
(Clone quality: bE450A14 on chr=1; Num_of_Contigs=8; )
Q95315_PIG   ENSSSCG00000005448 1:263163036-263167984   CU638717,CH242-176K19,1:263123683-263188501
(Clone quality: bE176K19 on chr=1; Num_of_Contigs=5; )
Q95JA3_PIG   ENSSSCG00000017582 12:24682654-24682728   CU694879,CH242-301O20,12:24681689-24690254
(Clone quality: bE301O20 on chr=12; Num_of_Contigs=13; )
Q95JA6_PIG   ENSSSCG00000015357 9:79533339-79533851   CU469257,CH242-80B4,9:79532161-79538187
(Clone quality: bE80B4 on chr=9; Num_of_Contigs=12; )
Q95L19_PIG   ENSSSCG00000017509 12:21069332-21074289   FP085518,CH242-274F4,12:21003722-21101963
(Clone quality: bE274F4 on chr=12; Num_of_Contigs=3; )
Q95N04_PIG   ENSSSCG00000015030 9:38602362-38625849    
Q99331_PIG   ENSSSCG00000004982 1:177450161-177457786   CU639454,CH242-168O7,1:177425380-177461060
(Clone quality: bE168O7 on chr=1; Num_of_Contigs=4; )
Q99331_PIG   ENSSSCG00000004987 1:177650199-177657824   FP067374,CH242-259E12,1:177602688-177664256
(Clone quality: bE259E12 on chr=1; Num_of_Contigs=2; )
Q9BDH4_PIG   ENSSSCG00000008963 8:59687058-59690763   FP236682,CH242-469E11,8:59686247-59692235
(Clone quality: bE469E11 on chr=8; Num_of_Contigs=18; )
Q9BDS3_PIG   ENSSSCG00000016183 15:113384840-113396203    
Q9BDS4_PIG   ENSSSCG00000016184 15:113424084-113426699    
Q9GK20_PIG   ENSSSCG00000009392 11:17940242-18022367    
Q9GKJ2_PIG   ENSSSCG00000011481 13:34039539-34045581   CU927912,CH242-524I3,13:34009927-34056008
(Clone quality: bE524I3 on chr=13; Num_of_Contigs=9; )
Q9GKJ2_PIG   ENSSSCG00000011475 13:33794264-33800306   CU914707,CH242-290I23,13:33655629-33831490
(Clone quality: bE290I23 on chr=13; Num_of_Contigs=1; )
Q9GKJ3_PIG   ENSSSCG00000011866 13:102657133-102917415    
Q9GKP8_PIG   ENSSSCG00000001902 7:64303265-64309532   CU468845,CH242-162A4,7:64176153-64332301
(Clone quality: bE162A4 on chr=7; Num_of_Contigs=2; )
Q9GL49_PIG   ENSSSCG00000004905 1:167846905-167849849   CU855866,CH242-18C13,1:167831711-167849989
(Clone quality: bE18C13 on chr=1; Num_of_Contigs=11; )
Q9GL49_PIG   ENSSSCG00000004906 1:168066314-168069258   CU633494,CH242-198F23,1:168026905-168104475
(Clone quality: bE198F23 on chr=1; Num_of_Contigs=5; )
Q9GLL8_PIG   ENSSSCG00000009315 11:4849478-4853710   CU861636,CH242-487J22,11:4843102-4855584
(Clone quality: bE487J22 on chr=11; Num_of_Contigs=10; )
Q9GMA7_PIG   ENSSSCG00000002486 7:124534585-124543258   CU302448,CH242-17C18,7:124533478-124548661
(Clone quality: bE17C18 on chr=7; Num_of_Contigs=5; )
Q9GMZ3_PIG   ENSSSCG00000000715 5:61177442-61177765   CU582813,CH242-426K5,5:61175186-61178004
(Clone quality: bE426K5 on chr=5; Num_of_Contigs=10; )
Q9MZA8_PIG   ENSSSCG00000017695 12:37029878-37030102   CU466977,CH242-506H19,12:37029322-37037310
(Clone quality: bE506H19 on chr=12; Num_of_Contigs=13; )
Q9N0Y9_PIG   ENSSSCG00000004626 1:124728464-124773384    
Q9N1D2_PIG   ENSSSCG00000000089 5:5237948-5303945    
Q9N1Y1_PIG   ENSSSCG00000012322 X:45371154-45421544    
Q9N1Y1_PIG   ENSSSCG00000012322 X:45371154-45421544    
Q9TRG6_PIG   ENSSSCG00000005213 1:226680900-226687262   CU302244,CH242-254J19,1:226615674-226772700
(Clone quality: bE254J19 on chr=1; Num_of_Contigs=1; )
Q9TSJ2_PIG   ENSSSCG00000001007 7:2837181-2849640    
Q9TSV9_PIG   ENSSSCG00000001232 7:24551875-24563032 CU311184,CH242-196B23,7:24509864-24676459
(Clone quality: bE196B23 on chr=7; Num_of_Contigs=3; ) 		 
Q9TSX0_PIG   ENSSSCG00000013317 2:26596563-26598709    
Q9TTN8_PIG   ENSSSCG00000006517 4:98621708-98622488   CU469433,CH242-42F16,4:98620833-98627354
(Clone quality: bE42F16 on chr=4; Num_of_Contigs=13; )
Q9TTN9_PIG   ENSSSCG00000014336 2:127526032-127528371   FP102255,CH242-413P24,2:127510301-127565540
(Clone quality: bE413P24 on chr=2; Num_of_Contigs=3; )
Q9TTN9_PIG   ENSSSCG00000014333 2:127433066-127434397   CU856219,CH242-295G13,2:127416432-127434522
(Clone quality: bE295G13 on chr=2; Num_of_Contigs=12; )
Q9TTZ4_PIG   ENSSSCG00000008154 3:47183056-47201127    
Q9TUK2_PIG   ENSSSCG00000012478 X:75146986-75148300   FP102041,CH242-189G21,X:75145280-75148424
(Clone quality: bE189G21 on chr=X; Num_of_Contigs=14; )
Q9TUP1_PIG   ENSSSCG00000016710 18:45005813-45011827    
Q9TUP6_PIG   ENSSSCG00000003597 6:60233361-60265104    
Q9XSE5_PIG   ENSSSCG00000013563 2:50600116-50609142   FP102248,CH242-295L18,2:50597874-50637371
(Clone quality: bE295L18 on chr=2; Num_of_Contigs=7; )
Q9XT08_PIG   ENSSSCG00000015663 9:132324204-132358249   CU633410,CH242-391L17,9:132252384-132466044
(Clone quality: bE391L17 on chr=9; Num_of_Contigs=2; )
Q9XT34_PIG   ENSSSCG00000013530 2:49506685-49507770   FP089464,CH242-231P22,2:49500853-49563374
(Clone quality: bE231P22 on chr=2; Num_of_Contigs=4; )
RL10A_PIG   ENSSSCG00000001543 7:35915060-35917923   CU467978,CH242-397F5,7:35872400-35952461
(Clone quality: bE397F5 on chr=7; Num_of_Contigs=4; )
RL10A_PIG   ENSSSCG00000001543 7:35915060-35917923   CU467978,CH242-397F5,7:35872400-35952461
(Clone quality: bE397F5 on chr=7; Num_of_Contigs=4; )
RL13A_PIG   ENSSSCG00000003181 6:38223686-38226501   FP102630,CH242-21M22,6:38210525-38227551
(Clone quality: bE21M22 on chr=6; Num_of_Contigs=8; )
RL13A_PIG   ENSSSCG00000003166 6:37975124-37979095   FP102665,CH242-289C15,6:37963305-38017162
(Clone quality: bE289C15 on chr=6; Num_of_Contigs=6; )
RL14_PIG   ENSSSCG00000011272 13:20479465-20483342   CU915326,CH242-250M9,13:20426329-20483808
(Clone quality: bE250M9 on chr=13; Num_of_Contigs=6; )
RL22_PIG   ENSSSCG00000003367 6:45393152-45402719   FP102454,CH242-79J15,6:45387357-45440384
(Clone quality: bE79J15 on chr=6; Num_of_Contigs=7; )
RL31_PIG   ENSSSCG00000008170 3:49013139-49018452   CU972480,CH242-163M6,3:49000719-49038401
(Clone quality: bE163M6 on chr=3; Num_of_Contigs=6; )
RL36A_PIG   ENSSSCG00000005005 1:187892653-187893837   CU633502,CH242-240C20,1:187883994-187931470
(Clone quality: bE240C20 on chr=1; Num_of_Contigs=4; )
RL36A_PIG   ENSSSCG00000016779 16:83873-84193   FP067395,CH242-430D5,16:81238-165661
(Clone quality: bE430D5 on chr=16; Num_of_Contigs=1; )
RL36A_PIG   ENSSSCG00000016952 16:41714390-41714710   CU915493,CH242-384B3,16:41661662-41795194
(Clone quality: bE384B3 on chr=16; Num_of_Contigs=3; )
RL5_PIG   ENSSSCG00000006899 4:128491745-128589042    
RL7L_PIG   ENSSSCG00000001643 7:43595236-43602946   CU466966,CH242-356A18,7:43587335-43610764
(Clone quality: bE356A18 on chr=7; Num_of_Contigs=15; )
RL7L_PIG   ENSSSCG00000001647 7:43787527-43795237 CR956379,CH242-196P11,7:43779717-43958428
(No clone quality info on bE196P11) 		 
RLA0_PIG   ENSSSCG00000009900 14:40380802-40385791    
RLA1_PIG   ENSSSCG00000004970 1:175035819-175037999   CU638844,CH242-265J12,1:174966719-175040362
(Clone quality: bE265J12 on chr=1; Num_of_Contigs=3; )
RLA2_PIG   ENSSSCG00000012842 2:156777-158745   CU928976,CH242-144M19,2:43742-170991
(Clone quality: bE144M19 on chr=2; Num_of_Contigs=17; )
RLBP1L2   ENSSSCG00000004232 1:41171476-41236908   CU457443,CH242-310O17,1:41128318-41331024
(Clone quality: bE310O17 on chr=1; Num_of_Contigs=1; )
RPL38   ENSSSCG00000017239 12:4939116-4944225 CU929509,CH242-210O23,12:4890845-5083024
(Clone quality: bE210O23 on chr=12; Num_of_Contigs=5; ) 		 
RPL6P10   ENSSSCG00000012032 13:138046855-138047013   CU627998,CH242-60H12,13:138028039-138049302
(Clone quality: bE60H12 on chr=13; Num_of_Contigs=8; )
RPS11P5   ENSSSCG00000003165 6:37963997-37966466   FP102665,CH242-289C15,6:37963305-38017162
(Clone quality: bE289C15 on chr=6; Num_of_Contigs=6; )
RPS25P8   ENSSSCG00000015103 9:44829714-44832972   CU695209,CH242-241K21,9:44763573-44853404
(Clone quality: bE241K21 on chr=9; Num_of_Contigs=5; )
RPS27P13   ENSSSCG00000006558 4:99736893-99927540    
RPS3AP47   ENSSSCG00000009458 11:44117007-44118070   CT961044,CH242-88E23,11:44107678-44126785
(Clone quality: bE88E23 on chr=11; Num_of_Contigs=3; )
RS16_PIG   ENSSSCG00000005432 1:260356660-260357100   CU062655,CH242-136A13,1:260296272-260358215
(Clone quality: bE136A13 on chr=1; Num_of_Contigs=2; )
RS17_PIG   ENSSSCG00000001812 7:58632413-58635336   CU914670,CH242-39H15,7:58614395-58653852
(Clone quality: bE39H15 on chr=7; Num_of_Contigs=4; )
RS17_PIG   ENSSSCG00000001809 7:58427129-58430051   CU633195,CH242-149O21,7:58383826-58451729
(Clone quality: bE149O21 on chr=7; Num_of_Contigs=8; )
RS18_PIG   ENSSSCG00000001502 7:34046184-34050277 CU607018,CH242-138E20,7:33930957-34116846
(Clone quality: bE138E20 on chr=7; Num_of_Contigs=1; ) 		 
RS26_PIG   ENSSSCG00000000374 5:20352716-20354573   CU457395,CH242-13B13,5:20350971-20357915
(Clone quality: bE13B13 on chr=5; Num_of_Contigs=23; )
RS28_PIG   ENSSSCG00000013597 2:51619624-51620699   FP090904,CH242-212F1,2:51608045-51700090
(Clone quality: bE212F1 on chr=2; Num_of_Contigs=2; )
RS29_PIG   ENSSSCG00000005003 1:187870452-187872715   CU633502,CH242-240C20,1:187832890-187878221
(Clone quality: bE240C20 on chr=1; Num_of_Contigs=4; )
RS3_PIG   ENSSSCG00000014855 9:9323645-9326970   CU655994,CH242-280C8,9:9289835-9327436
(Clone quality: bE280C8 on chr=9; Num_of_Contigs=8; )
S22A7_PIG   ENSSSCG00000001665 7:44175428-44181185 CR974479,PigE-150P18,7:44038129-44188858
(Clone quality: bT150P18 on chr=7; Num_of_Contigs=4; ) 		 
S22A7_PIG   ENSSSCG00000001671 7:44398307-44404064   CU633197,CH242-208A12,7:44373545-44458678
(Clone quality: bE208A12 on chr=7; Num_of_Contigs=8; )
SAHH_PIG   ENSSSCG00000007278 17:39808805-39821501   CU606946,CH242-245E11,17:39642724-39823287
(Clone quality: bE245E11 on chr=17; Num_of_Contigs=2; )
SAL_PIG   ENSSSCG00000005474 1:266548070-266552930   CU041260,CH242-55A14,1:266438281-266562122
(Clone quality: bE55A14 on chr=1; Num_of_Contigs=9; )
SAR1A_PIG   ENSSSCG00000010260 14:76032227-76048157    
SAT1_PIG   ENSSSCG00000012173 X:18735356-18738387   CU855499,CH242-206C22,X:18734944-18752333
(Clone quality: bE206C22 on chr=X; Num_of_Contigs=6; )
SC5A1_PIG   ENSSSCG00000010036 14:49513275-49664648    
SCAMP1   ENSSSCG00000014103 2:76310779-76338860   CU467790,CH242-520F21,2:76299276-76401251
(Clone quality: bE520F21 on chr=2; Num_of_Contigs=6; )
SCAP_PIG   ENSSSCG00000011337 13:25286969-25331377   CU633348,CH242-158N8,13:25277659-25344664
(Clone quality: bE158N8 on chr=13; Num_of_Contigs=9; )
SCAP_PIG   ENSSSCG00000011335 13:25148651-25193199    
SELK_PIG   ENSSSCG00000011459 13:30226564-30233984   CU466421,CH242-96K10,13:30195284-30280608
(Clone quality: bE96K10 on chr=13; Num_of_Contigs=2; )
SEPW1   ENSSSCG00000002986 6:33376815-33377609   FP102547,CH242-120H3,6:33375907-33395729
(Clone quality: bE120H3 on chr=6; Num_of_Contigs=3; )
SLC16A6   ENSSSCG00000017262 12:10144812-10153995    
SOMA_PIG   ENSSSCG00000017284 12:12638816-12640578   CU466386,CH242-271O11,12:12583385-12667411
(Clone quality: bE271O11 on chr=12; Num_of_Contigs=5; )
SPRR1_PIG   ENSSSCG00000006593 4:100427656-100451675    
SSLP1_PIG   ENSSSCG00000015219 9:51521016-51527245   CU928873,CH242-5G4,9:51517596-51527834
(Clone quality: bE5G4 on chr=9; Num_of_Contigs=16; )
SSLP1_PIG   ENSSSCG00000011096 10:52933501-52939730   CU928908,CH242-15N1,10:52933263-52941588
(Clone quality: bE15N1 on chr=10; Num_of_Contigs=31; )
STA5A_PIG   ENSSSCG00000017402 12:17923290-17946321    
STK6_PIG   ENSSSCG00000007493 17:59489642-59506801 CR956640,CH242-155M9,17:59463698-59643740
(No clone quality info on bE155M9) 		 
STP4_PIG   ENSSSCG00000012723 X:116939969-116940741   CU928242,CH242-119C15,X:116938106-116966293
(Clone quality: bE119C15 on chr=X; Num_of_Contigs=9; )
T22D3_PIG   ENSSSCG00000012563 X:86347451-86351177    
T22D3_PIG   ENSSSCG00000012559 X:86096769-86100600   FP074898,CH242-294L14,X:86058638-86138881
(Clone quality: bE294L14 on chr=X; Num_of_Contigs=4; )
TBA1B_PIG   ENSSSCG00000000190 5:13787638-13900905    
TBA1B_PIG   ENSSSCG00000000190 5:13787638-13900905    
TBB5_PIG   ENSSSCG00000001379 7:27204866-27209280 CU480634,CH242-391N4,7:27128408-27216112
(Clone quality: bE391N4 on chr=7; Num_of_Contigs=11; ) 		 
TCPZ_PIG   ENSSSCG00000007746 3:15355394-15395652    
THRB_PIG   ENSSSCG00000013252 2:13964296-13990453    
THRB_PIG   ENSSSCG00000013252 2:13964296-13990453    
TMEM132D   ENSSSCG00000009752 14:25391692-26074407    
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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