A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 24401 - 24500:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
NP_999579.1   ENSSSCG00000010546 14:115994622-116026754    
NP_999585.1   ENSSSCG00000010488 14:111627139-111667418   CU392852,CH242-517O10,14:111617888-111696161
(Clone quality: bE517O10 on chr=14; Num_of_Contigs=2; )
NU1M_PIG   ENSSSCG00000018065 MT:3922-4878    
NU2M_PIG   ENSSSCG00000018069 MT:5087-6130    
NU3M_PIG   ENSSSCG00000018084 MT:10653-10998    
NU4LM_PIG   ENSSSCG00000018086 MT:11069-11365    
NU4M_PIG   ENSSSCG00000018087 MT:11359-12736    
NU5M_PIG   ENSSSCG00000018091 MT:12935-14755    
NU6M_PIG   ENSSSCG00000018092 MT:14739-15266    
O18762_PIG   ENSSSCG00000005592 1:280125370-280133426   CU633730,CH242-82E3,1:280090425-280133791
(Clone quality: bE82E3 on chr=1; Num_of_Contigs=5; )
O18916_PIG   ENSSSCG00000017748 12:41272513-41545005    
O46422_PIG   ENSSSCG00000018006 12:52321065-52323264   CU896583,CH242-266H2,12:52318419-52326160
(Clone quality: bE266H2 on chr=12; Num_of_Contigs=8; )
O46536_PIG   ENSSSCG00000008766 8:19095682-19096086   CU582884,CH242-26K3,8:19093821-19096630
(Clone quality: bE26K3 on chr=8; Num_of_Contigs=2; )
O46536_PIG   ENSSSCG00000008765 8:18939926-18948728    
O46558_PIG   ENSSSCG00000001694 7:45063966-45064037   CU633430,CH242-74P4,7:45061715-45064923
(Clone quality: bE74P4 on chr=7; Num_of_Contigs=15; )
O46604_PIG   ENSSSCG00000010698 14:137545133-137610498    
O46604_PIG   ENSSSCG00000010695 14:137312881-137415111   CU633661,CH242-210O20,14:137234060-137447590
(Clone quality: bE210O20 on chr=14; Num_of_Contigs=2; )
O46604_PIG   ENSSSCG00000010698 14:137545133-137610498    
O46604_PIG   ENSSSCG00000010695 14:137312881-137415111   CU633661,CH242-210O20,14:137234060-137447590
(Clone quality: bE210O20 on chr=14; Num_of_Contigs=2; )
O46604_PIG   ENSSSCG00000010695 14:137312881-137415111   CU633661,CH242-210O20,14:137234060-137447590
(Clone quality: bE210O20 on chr=14; Num_of_Contigs=2; )
O46604_PIG   ENSSSCG00000010695 14:137312881-137415111   CU633661,CH242-210O20,14:137234060-137447590
(Clone quality: bE210O20 on chr=14; Num_of_Contigs=2; )
O46604_PIG   ENSSSCG00000010698 14:137545133-137610498    
O62629_PIG   ENSSSCG00000013443 2:46842340-46842612   FP236669,CH242-487E14,2:46826661-46859499
(Clone quality: bE487E14 on chr=2; Num_of_Contigs=9; )
O62629_PIG   ENSSSCG00000011908 13:106423890-106424162   CU633666,CH242-229M20,13:106390303-106485096
(Clone quality: bE229M20 on chr=13; Num_of_Contigs=2; )
O62631_PIG   ENSSSCG00000012471 X:70859888-70860160 FP085367,CH242-184K14,X:70742273-70879229
(Clone quality: bE184K14 on chr=X; Num_of_Contigs=1; ) 		 
O62632_PIG   ENSSSCG00000007793 3:16422800-16423072   CU928725,CH242-25P12,3:16421352-16446649
(Clone quality: bE25P12 on chr=3; Num_of_Contigs=8; )
O62660_PIG   ENSSSCG00000017436 12:18905520-18905771   CU929492,CH242-164M20,12:18896495-18909387
(Clone quality: bE164M20 on chr=12; Num_of_Contigs=5; )
O62660_PIG   ENSSSCG00000017442 12:18998656-18998907   CU929492,CH242-164M20,12:18977432-19004793
(Clone quality: bE164M20 on chr=12; Num_of_Contigs=5; )
O62724_PIG   ENSSSCG00000011868 13:103191797-103191937   CU466991,CH242-220A1,13:103185809-103210249
(Clone quality: bE220A1 on chr=13; Num_of_Contigs=5; )
O62737_PIG   ENSSSCG00000004624 1:124590098-124603484   CU468047,CH242-327N5,1:124551351-124620384
(Clone quality: bE327N5 on chr=1; Num_of_Contigs=4; )
O62788_PIG   ENSSSCG00000004804 1:143735142-143736549   CU633172,CH242-367L17,1:143731030-143743680
(Clone quality: bE367L17 on chr=1; Num_of_Contigs=16; )
O77542_PIG   ENSSSCG00000001313 7:26050602-26051564 CU633828,CH242-250L23,7:25997094-26187544
(Clone quality: bE250L23 on chr=7; Num_of_Contigs=12; ) 		 
O77545_PIG   ENSSSCG00000014470 2:137152675-137153619   CU928592,CH242-110I19,2:137146876-137169104
(Clone quality: bE110I19 on chr=2; Num_of_Contigs=15; )
O77545_PIG   ENSSSCG00000014479 2:137291487-137292425   CU928805,CH242-143K11,2:137273070-137326243
(Clone quality: bE143K11 on chr=2; Num_of_Contigs=9; )
O77547_PIG   ENSSSCG00000013822 2:59659899-59660825   FP102479,CH242-142N9,2:59625317-59669553
(Clone quality: bE142N9 on chr=2; Num_of_Contigs=4; )
O77548_PIG   ENSSSCG00000005548 1:276978381-276979506    
O77665_PIG   ENSSSCG00000001460 7:29316379-29326886 CU633196,CH242-203E5,7:29272940-29352095
(Clone quality: bE203E5 on chr=7; Num_of_Contigs=1; ) 		 
O77677_PIG   ENSSSCG00000017312 12:15086224-15086991   CU693465,CH242-266I14,12:15085716-15108218
(Clone quality: bE266I14 on chr=12; Num_of_Contigs=9; )
O77739_PIG   ENSSSCG00000002489 7:124671771-124672439   CU302448,CH242-17C18,7:124558761-124696416
(Clone quality: bE17C18 on chr=7; Num_of_Contigs=5; )
O77739_PIG   ENSSSCG00000002490 7:124755334-124756812   CU041307,CH242-24A8,7:124696417-124896527
(Clone quality: bE24A8 on chr=7; Num_of_Contigs=5; )
O77789_PIG   ENSSSCG00000007744 3:15339526-15341664   FP102627,CH242-216K18,3:15339207-15358620
(Clone quality: bE216K18 on chr=3; Num_of_Contigs=6; )
O97673_PIG   ENSSSCG00000013564 2:50619055-50632124   FP102248,CH242-295L18,2:50597874-50637371
(Clone quality: bE295L18 on chr=2; Num_of_Contigs=7; )
O97673_PIG   ENSSSCG00000013564 2:50619055-50632124   FP102248,CH242-295L18,2:50597874-50637371
(Clone quality: bE295L18 on chr=2; Num_of_Contigs=7; )
OBP_PIG   ENSSSCG00000012095 X:1587313-1594826 CU914699,CH242-216A23,X:1468476-1601373
(Clone quality: bE216A23 on chr=X; Num_of_Contigs=3; ) 		 
ODZ3   ENSSSCG00000015774 15:41483604-41638635    
OPRM_PIG   ENSSSCG00000004074 1:13524957-13572249    
OR10A6   ENSSSCG00000014584 9:952784-953728   CU856119,CH242-498F22,9:951124-960154
(Clone quality: bE498F22 on chr=9; Num_of_Contigs=24; )
OR10D4P   ENSSSCG00000015173 9:49690240-49691172   CU856234,CH242-6B11,9:49662749-49762584
(Clone quality: bE6B11 on chr=9; Num_of_Contigs=3; )
OR10G6   ENSSSCG00000015167 9:49570903-49571826   CU928994,CH242-35E17,9:49557873-49574370
(Clone quality: bE35E17 on chr=9; Num_of_Contigs=16; )
OR10Q1   ENSSSCG00000013164 2:10835088-10836044   CU929481,CH242-19M3,2:10815276-10863130
(Clone quality: bE19M3 on chr=2; Num_of_Contigs=5; )
OR4C5   ENSSSCG00000013205 2:12294410-12295336   CU929033,CH242-44G4,2:12273720-12297053
(Clone quality: bE44G4 on chr=2; Num_of_Contigs=6; )
OR52E5   ENSSSCG00000014649 9:3005205-3006146   CU640462,CH242-281A12,9:2853462-3033951
(Clone quality: bE281A12 on chr=9; Num_of_Contigs=1; )
OR6J1   ENSSSCG00000002052 7:82746344-82747327   CU407030,CH242-171E18,7:82670262-82752637
(Clone quality: bE171E18 on chr=7; Num_of_Contigs=3; )
OR7A5   ENSSSCG00000007752 3:15564651-15565586   FP102600,CH242-175H12,3:15551358-15569103
(Clone quality: bE175H12 on chr=3; Num_of_Contigs=9; )
OX2R_PIG   ENSSSCG00000001482 7:30352218-30361122   CU468942,CH242-164A10,7:30342615-30421326
(Clone quality: bE164A10 on chr=7; Num_of_Contigs=3; )
OXDD_PIG   ENSSSCG00000004401 1:79616452-79641334    
OXSR1_PIG   ENSSSCG00000011252 13:18952317-19025261    
P79302_PIG   ENSSSCG00000011571 13:55704621-55704707   CU469341,CH242-394A9,13:55702257-55705779
(Clone quality: bE394A9 on chr=13; Num_of_Contigs=26; )
P79321_PIG   ENSSSCG00000015829 15:46933712-46943741   CU582801,CH242-263J16,15:46920043-46945113
(Clone quality: bE263J16 on chr=15; Num_of_Contigs=9; )
P79326_PIG   ENSSSCG00000002535 7:131807953-131809819   CU633632,CH242-139M12,7:131807603-131831335
(Clone quality: bE139M12 on chr=7; Num_of_Contigs=22; )
PB1_PIG   ENSSSCG00000003053 6:34884420-34886452   FP102750,CH242-80G20,6:34865935-34887494
(Clone quality: bE80G20 on chr=6; Num_of_Contigs=9; )
PDPR   ENSSSCG00000002721 6:9634339-9651203    
PEPA_PIG   ENSSSCG00000013092 2:8592036-8600552   CU462918,CH242-143A4,2:8550914-8626150
(Clone quality: bE143A4 on chr=2; Num_of_Contigs=7; )
PEPB_PIG   ENSSSCG00000006792 4:113312454-113322817   CU311186,CH242-230C12,4:113251594-113376287
(Clone quality: bE230C12 on chr=4; Num_of_Contigs=3; )
PEVRA_PIG   ENSSSCG00000005908 4:535929-538768   CU468594,CH242-10O17,4:503788-542119
(Clone quality: bE10O17 on chr=4; Num_of_Contigs=10; )
PHP14_PIG   ENSSSCG00000005826 1:294081272-294082732   FP236151,CH242-517G10,1:294077389-294085146
(Clone quality: bE517G10 on chr=1; Num_of_Contigs=14; )
PHP14_PIG   ENSSSCG00000005826 1:294081272-294082732   FP236151,CH242-517G10,1:294077389-294085146
(Clone quality: bE517G10 on chr=1; Num_of_Contigs=14; )
PHTNS_PIG   ENSSSCG00000001357 7:26849610-26857315   FP067362,CH242-312H17,7:26849596-26858884
(Clone quality: bE312H17 on chr=7; Num_of_Contigs=15; )
PHTNS_PIG   ENSSSCG00000001377 7:27168809-27177337 CU480634,CH242-391N4,7:27128408-27216112
(Clone quality: bE391N4 on chr=7; Num_of_Contigs=11; ) 		 
PLAL1_PIG   ENSSSCG00000004127 1:22330280-22350417   CU861515,CH242-118D7,1:22209109-22355773
(Clone quality: bE118D7 on chr=1; Num_of_Contigs=2; )
PLEKHA9   ENSSSCG00000016682 18:41242458-41276816   CU694612,CH242-369I21,18:41219287-41305004
(Clone quality: bE369I21 on chr=18; Num_of_Contigs=4; )
PLF4_PIG   ENSSSCG00000008955 8:59479535-59480815   CU928337,CH242-266F15,8:59474833-59511571
(Clone quality: bE266F15 on chr=8; Num_of_Contigs=10; )
PLF4_PIG   ENSSSCG00000000243 5:16294567-16295847   CU930049,CH242-185F9,5:16292056-16303046
(Clone quality: bE185F9 on chr=5; Num_of_Contigs=28; )
PSN2_PIG   ENSSSCG00000010860 10:14358486-14375721   CU633390,CH242-295A1,10:14311132-14441242
(Clone quality: bE295A1 on chr=10; Num_of_Contigs=1; )
PTTG1_PIG   ENSSSCG00000017032 16:60571623-60579247   CU928350,CH242-226E17,16:60563924-60593473
(Clone quality: bE226E17 on chr=16; Num_of_Contigs=6; )
Q000W9_PIG   ENSSSCG00000013642 2:52940179-52941476   CU993813,CH242-86K24,2:52937567-52943390
(Clone quality: bE86K24 on chr=2; Num_of_Contigs=13; )
Q09N05_PIG   ENSSSCG00000006118 4:46261306-46261446   CU179727,CH242-91N10,4:46257070-46271825
(Clone quality: bE91N10 on chr=4; Num_of_Contigs=20; )
Q09N05_PIG   ENSSSCG00000006117 4:46189559-46189699   FP089561,CH242-272E5,4:46173974-46206053
(Clone quality: bE272E5 on chr=4; Num_of_Contigs=5; )
Q0GC45_PIG   ENSSSCG00000005147 1:210148003-210148572   CU618316,CH242-254N10,1:210132941-210188533
(Clone quality: bE254N10 on chr=1; Num_of_Contigs=2; )
Q0GFA4_PIG   ENSSSCG00000016573 18:17836661-17842820   CU928618,CH242-79D19,18:17819272-17900722
(Clone quality: bE79D19 on chr=18; Num_of_Contigs=3; )
Q0GFA6_PIG   ENSSSCG00000003179 6:38194759-38195469   FP102630,CH242-21M22,6:38193113-38201419
(Clone quality: bE21M22 on chr=6; Num_of_Contigs=8; )
Q0KKC1_PIG   ENSSSCG00000003907 6:118271855-118280837   CU694667,CH242-117A15,6:118247749-118318723
(Clone quality: bE117A15 on chr=6; Num_of_Contigs=3; )
Q0KKC1_PIG   ENSSSCG00000003911 6:118355220-118364727   CU464168,CH242-477B24,6:118349288-118384356
(Clone quality: bE477B24 on chr=6; Num_of_Contigs=7; )
Q0Q4H0_PIG   ENSSSCG00000012935 2:4133239-4138442   CU928093,CH242-168G1,2:4131589-4155461
(Clone quality: bE168G1 on chr=2; Num_of_Contigs=25; )
Q0Q4H0_PIG   ENSSSCG00000012949 2:4418288-4423491   CU928034,CH242-426E24,2:4401193-4424111
(Clone quality: bE426E24 on chr=2; Num_of_Contigs=5; )
Q0W959_PIG   ENSSSCG00000010269 14:76503992-76511339   CT737240,CH242-107C23,14:76500681-76511473
(Clone quality: bE107C23 on chr=14; Num_of_Contigs=2; )
Q0W959_PIG   ENSSSCG00000010265 14:76258016-76259885    
Q0Z8R0_PIG   ENSSSCG00000007128 17:32216931-32220668   CU855486,CH242-118N5,17:32216750-32231251
(Clone quality: bE118N5 on chr=17; Num_of_Contigs=6; )
Q0Z8R0_PIG   ENSSSCG00000007127 17:32063719-32067456   CU606898,CH242-256N2,17:31905701-32110440
(Clone quality: bE256N2 on chr=17; Num_of_Contigs=3; )
Q0ZHH8_PIG   ENSSSCG00000005231 1:229483388-229527928    
Q15I74_PIG   ENSSSCG00000004321 1:60406108-60407557   FP089480,CH242-211K7,1:60401400-60412897
(Clone quality: bE211K7 on chr=1; Num_of_Contigs=6; )
Q15I76_PIG   ENSSSCG00000004286 1:55454543-55455298   CU468562,CH242-237C6,1:55449741-55460129
(Clone quality: bE237C6 on chr=1; Num_of_Contigs=16; )
Q19QS7_PIG   ENSSSCG00000003782 6:97349551-97349622   CU694582,CH242-24J21,6:97282752-97368371
(Clone quality: bE24J21 on chr=6; Num_of_Contigs=3; )
Q1HCN5_PIG   ENSSSCG00000018040 12:56456866-56458625   CU467081,CH242-221I17,12:56431900-56466220
(Clone quality: bE221I17 on chr=12; Num_of_Contigs=15; )
Q1HE50_PIG   ENSSSCG00000011155 10:62288198-62301350    
Q1HGG8_PIG   ENSSSCG00000005321 1:247602373-247602768   CU074289,CH242-130G19,1:247583036-247668986
(Clone quality: bE130G19 on chr=1; Num_of_Contigs=3; )
Q1HNM7_PIG   ENSSSCG00000017579 12:24667625-24687958    
Q1KLB2_PIG   ENSSSCG00000011154 10:62258095-62305073    
Q1KLB2_PIG   ENSSSCG00000011154 10:62258095-62305073    
Q1KLB2_PIG   ENSSSCG00000011149 10:61989052-62035989   CU972427,CH242-23K3,10:61914453-62050813
(Clone quality: bE23K3 on chr=10; Num_of_Contigs=1; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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