A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 13001 - 13100:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
TUBGCP3   ENSSSCG00000009553 11:78563442-78604226 CU207380,CH242-239P7,11:78415790-78615641
(Clone quality: bE239P7 on chr=11; Num_of_Contigs=7; ) 		 
TUBGCP4   ENSSSCG00000004708 1:134120932-134175216    
TUBGCP5   ENSSSCG00000015736 15:29090707-29092535   CU606932,CH242-515L21,15:29088375-29092558
(Clone quality: bE515L21 on chr=15; Num_of_Contigs=27; )
TUBGCP6   ENSSSCG00000000972 5:99820009-99841779    
TUFM ENSSSCG00000007803 3:16633667-16637048   CU928476,CH242-24P1,3:16614299-16641736
(Clone quality: bE24P1 on chr=3; Num_of_Contigs=5; )
TULP1   ENSSSCG00000001545 7:35950192-35961862    
TULP2   ENSSSCG00000003149 6:37727313-37734940    
TULP3   ENSSSCG00000000737 5:63077873-63114462   CU856242,CH242-195D5,5:63054017-63118628
(Clone quality: bE195D5 on chr=5; Num_of_Contigs=10; )
TULP4   ENSSSCG00000004059 1:9768478-9770087   CU914176,CH242-157G12,1:9761086-9775855
(Clone quality: bE157G12 on chr=1; Num_of_Contigs=9; )
TUSC1   ENSSSCG00000005128 1:206192199-206192828   CU855511,CH242-258I17,1:206159768-206249232
(Clone quality: bE258I17 on chr=1; Num_of_Contigs=2; )
TUSC2   ENSSSCG00000011406 13:27473729-27476374   CU861907,CH242-10C8,13:27455563-27490719
(Clone quality: bE10C8 on chr=13; Num_of_Contigs=3; )
TUSC4   ENSSSCG00000011409 13:27491534-27494819   CU861907,CH242-10C8,13:27490820-27610755
(Clone quality: bE10C8 on chr=13; Num_of_Contigs=3; )
TUSC5   ENSSSCG00000017801 12:44559906-44570485    
TUT1   ENSSSCG00000013063 2:7499168-7512481   FP102338,CH242-94E13,2:7490082-7534927
(Clone quality: bE94E13 on chr=2; Num_of_Contigs=10; )
TWF1   ENSSSCG00000000798 5:70896710-70907659   FP102342,PigI-719A6,5:70839195-70984027
(Clone quality: bI719A6 on chr=5; Num_of_Contigs=1; )
TWIST1   ENSSSCG00000015370 9:82730209-82730954    
TWISTNB   ENSSSCG00000015372 9:83375291-83484643    
TWSG1 ENSSSCG00000003681 6:67309206-67355512    
TXK ENSSSCG00000008819 8:32499454-32566755    
TXLNA ENSSSCG00000003617 6:60914156-60926352    
TXLNB   ENSSSCG00000004143 1:26574140-26613539    
TXN ENSSSCG00000005453 1:263983103-264032572    
TXN ENSSSCG00000005453 1:263983103-264032572    
TXN2   ENSSSCG00000000144 5:7704458-7717661   CU928818,CH242-252E6,5:7696847-7741655
(Clone quality: bE252E6 on chr=5; Num_of_Contigs=9; )
TXNDC11   ENSSSCG00000007896 3:28086893-28126599    
TXNDC12 ENSSSCG00000003867 6:113960876-113975266    
TXNDC17   ENSSSCG00000017891 12:47981543-47984235   CU571053,CH242-64E15,12:47942312-48004602
(Clone quality: bE64E15 on chr=12; Num_of_Contigs=3; )
TXNDC3   ENSSSCG00000015448 9:101211852-101246073    
TXNDC6   ENSSSCG00000011659 13:64961858-64970348   CU915328,CH242-252D2,13:64912315-64972199
(Clone quality: bE252D2 on chr=13; Num_of_Contigs=10; )
TXNDC8   ENSSSCG00000005454 1:263995182-264015173    
TXNIP ENSSSCG00000006681 4:103433742-103437296   CU151864,CH242-277H11,4:103383388-103453720
(Clone quality: bE277H11 on chr=4; Num_of_Contigs=7; )
TXNIP ENSSSCG00000006681 4:103433742-103437296   CU151864,CH242-277H11,4:103383388-103453720
(Clone quality: bE277H11 on chr=4; Num_of_Contigs=7; )
TXNL1   ENSSSCG00000004537 1:109164800-109204634    
TXNL4A   ENSSSCG00000005777 1:290997073-291013175   CU041273,CH242-39O17,1:290960996-291029484
(Clone quality: bE39O17 on chr=1; Num_of_Contigs=4; )
TXNL4B   ENSSSCG00000002751 6:10797840-10800771   CU914723,CH242-491H10,6:10781997-10802656
(Clone quality: bE491H10 on chr=6; Num_of_Contigs=16; )
TXNRD1   ENSSSCG00000000843 5:75140645-75208149    
TXNRD2   ENSSSCG00000010131 14:52609540-52638915   CT737290,CH242-153A5,14:52550615-52684021
(Clone quality: bE153A5 on chr=14; Num_of_Contigs=5; )
Tyk2 ENSSSCG00000013648 2:53126801-53152421    
TYK2 ENSSSCG00000013648 2:53126801-53152421    
TYR ENSSSCG00000001969 7:74188390-74210719    
TYR ENSSSCG00000002431 7:119621566-119707343    
TYR ENSSSCG00000007098 17:27602731-27721837    
TYRO3 ENSSSCG00000004744 1:136222813-136239205   CU633572,CH242-274F1,1:136202998-136286247
(Clone quality: bE274F1 on chr=1; Num_of_Contigs=12; )
TYROBP ENSSSCG00000002919 6:30466058-30469384   CU466979,CH242-510C11,6:30452219-30481257
(Clone quality: bE510C11 on chr=6; Num_of_Contigs=10; )
TYRP1   ENSSSCG00000005193 1:219103973-219121975   CU302437,CH242-341J3,1:219022894-219162934
(Clone quality: bE341J3 on chr=1; Num_of_Contigs=2; )
TYW3   ENSSSCG00000003779 6:97005715-97021496    
U11   ENSSSCG00000019109 8:97425817-97425950   CU694780,CH242-227M23,8:97419841-97430863
(Clone quality: bE227M23 on chr=8; Num_of_Contigs=11; )
U12   ENSSSCG00000018599 14:35603071-35603218   CT737179,CH242-7H2,14:35543952-35742587
(Clone quality: bE7H2 on chr=14; Num_of_Contigs=1; )
U12   ENSSSCG00000019768 5:2863318-2863467   CU928642,CH242-477C10,5:2845539-2874049
(Clone quality: bE477C10 on chr=5; Num_of_Contigs=6; )
U2AF1L4   ENSSSCG00000002896 6:30163228-30167976   FP243365,CH242-219O7,6:30147881-30183141
(Clone quality: bE219O7 on chr=6; Num_of_Contigs=6; )
U6atac   ENSSSCG00000018216 17:5324105-5324221   CU896622,CH242-393D10,17:5287331-5325050
(Clone quality: bE393D10 on chr=17; Num_of_Contigs=1; )
UACA   ENSSSCG00000004973 1:176106403-176166536    
UAP1   ENSSSCG00000006340 4:91715409-91749383   CU582933,CH242-9F13,4:91698822-91785990
(Clone quality: bE9F13 on chr=4; Num_of_Contigs=3; )
UATP.I ENSSSCG00000017754 12:42052998-42066816    
UBA1   ENSSSCG00000012270 X:41770940-41947876    
UBA2   ENSSSCG00000002876 6:29488702-29526486   CU929964,CH242-62K4,6:29482801-29678966
(Clone quality: bE62K4 on chr=6; Num_of_Contigs=2; )
UBA5 ENSSSCG00000011631 13:60643343-60792925    
UBA52 ENSSSCG00000013907 2:62547853-62550337   FP102402,CH242-83K20,2:62531972-62552811
(Clone quality: bE83K20 on chr=2; Num_of_Contigs=3; )
UBA6   ENSSSCG00000008924 8:56345674-56422283    
UBA7   ENSSSCG00000011393 13:27091825-27100758   CU914539,CH242-222N14,13:27078304-27105846
(Clone quality: bE222N14 on chr=13; Num_of_Contigs=2; )
UBAC2   ENSSSCG00000009516 11:69032412-69068339    
UBAP2L   ENSSSCG00000006553 4:99515392-99563628   CU856218,CH242-277E7,4:99509313-99581754
(Clone quality: bE277E7 on chr=4; Num_of_Contigs=4; )
UBASH3B   ENSSSCG00000015136 9:48272269-48307426   CU639472,CH242-130N11,9:48226708-48363863
(Clone quality: bE130N11 on chr=9; Num_of_Contigs=2; )
UBB   ENSSSCG00000018033 12:56213149-56213835   CU927969,CH242-33C22,12:56209473-56233197
(No clone quality info on )
UBE2A   ENSSSCG00000012621 X:96618415-96627995   CU467108,CH242-78C24,X:96611677-96643719
(Clone quality: bE78C24 on chr=X; Num_of_Contigs=9; )
UBE2C   ENSSSCG00000007423 17:50082565-50085707   CU076086,CH242-56C16,17:49960216-50115189
(Clone quality: bE56C16 on chr=17; Num_of_Contigs=2; )
UBE2D1   ENSSSCG00000010419 14:96895555-96905796    
UBE2D2   ENSSSCG00000014358 2:128671505-128690127    
UBE2D3   ENSSSCG00000009167 8:101415843-101427461   CU972368,CH242-513E6,8:101410807-101442931
(Clone quality: bE513E6 on chr=8; Num_of_Contigs=4; )
UBE2D4   ENSSSCG00000016722 18:47377877-47398530    
UBE2E2   ENSSSCG00000011209 13:8633044-8723679   CU633903,CH242-265H17,13:8624321-8769900
(Clone quality: bE265H17 on chr=13; Num_of_Contigs=2; )
UBE2G1 ENSSSCG00000017878 12:47515462-47598747    
UBE2H ENSSSCG00000016564 18:16930378-17082949    
UBE2J2   ENSSSCG00000003334 6:42827546-42839848    
UBE2K   ENSSSCG00000008791 8:26170493-26242359    
UBE2L3   ENSSSCG00000010088 14:51339903-51389142   CU633431,CH242-79C11,14:51180713-51414471
(Clone quality: bE79C11 on chr=14; Num_of_Contigs=4; )
UBE2N ENSSSCG00000000908 5:84008035-84009996   CU915373,CH242-67L15,5:84003378-84016228
(Clone quality: bE67L15 on chr=5; Num_of_Contigs=3; )
UBE2NL   ENSSSCG00000004151 1:27365895-27366353   CU457402,CH242-189P20,1:27348176-27448920
(Clone quality: bE189P20 on chr=1; Num_of_Contigs=3; )
UBE2Q1   ENSSSCG00000006544 4:99262524-99296581 CU469085,CH242-42I4,4:99200352-99380372
(Clone quality: bE42I4 on chr=4; Num_of_Contigs=1; ) 		 
UBE2QL1   ENSSSCG00000017105 16:72812055-72857673    
UBE2R2   ENSSSCG00000010989 10:31508071-31523087   CU633320,CH242-86P2,10:31485466-31523504
(Clone quality: bE86P2 on chr=10; Num_of_Contigs=12; )
UBE2S   ENSSSCG00000003291 6:41318106-41323204   FP245423,CH242-507H20,6:41317281-41333293
(Clone quality: bE507H20 on chr=6; Num_of_Contigs=16; )
UBE2T   ENSSSCG00000010924 10:24508005-24512563   CU929522,CH242-133L15,10:24469362-24590809
(Clone quality: bE133L15 on chr=10; Num_of_Contigs=3; )
UBE2U   ENSSSCG00000003810 6:104416813-104514987    
UBE2W   ENSSSCG00000006177 4:64197630-64267878   CU210930,CH242-386B23,4:64175433-64296491
(Clone quality: bE386B23 on chr=4; Num_of_Contigs=3; )
UBE3A   ENSSSCG00000004832 1:149311628-149409522   CU856472,CH242-6D24,1:149309067-149483598
(Clone quality: bE6D24 on chr=1; Num_of_Contigs=1; )
UBE3B   ENSSSCG00000009933 14:41614115-41671338    
UBE3C   ENSSSCG00000016409 18:645622-764163    
UBE4A   ENSSSCG00000015095 9:44546462-44587222   CU914235,CH242-177G19,9:44486144-44604301
(Clone quality: bE177G19 on chr=9; Num_of_Contigs=2; )
UBE4B   ENSSSCG00000003398 6:47304653-47337410    
UBFD1   ENSSSCG00000010796 10:74265-86228   CU929008,CH242-207N16,10:36882-91422
(Clone quality: bE207N16 on chr=10; Num_of_Contigs=6; )
UBL3 ENSSSCG00000009325 11:6136893-6198799    
UBL5   ENSSSCG00000016886 16:29397538-29397759   CU856099,CH242-229O6,16:29395398-29401618
(Clone quality: bE229O6 on chr=16; Num_of_Contigs=11; )
UBL7   ENSSSCG00000001907 7:64613269-64626634   CU638715,CH242-118M5,7:64531973-64634730
(Clone quality: bE118M5 on chr=7; Num_of_Contigs=2; )
UBLCP1   ENSSSCG00000017042 16:61854613-61876683   CU570833,CH242-250F18,16:61833703-61916627
(Clone quality: bE250F18 on chr=16; Num_of_Contigs=7; )
UBN1   ENSSSCG00000007924 3:33395490-33406823    
UBN2   ENSSSCG00000016510 18:8578867-8621308    
UBOX5   ENSSSCG00000007162 17:34094978-34133688    
UBP ENSSSCG00000001907 7:64613269-64626634   CU638715,CH242-118M5,7:64531973-64634730
(Clone quality: bE118M5 on chr=7; Num_of_Contigs=2; )
UBP1   ENSSSCG00000011235 13:16178022-16222958    
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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