A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 12601 - 12700:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
TNF ENSSSCG00000001404 7:27658519-27661277 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
TNFAIP3 ENSSSCG00000004154 1:27897946-27902856    
TNFAIP3 ENSSSCG00000008691 8:919341-923975   CU930000,CH242-128J21,8:903580-924566
(Clone quality: bE128J21 on chr=8; Num_of_Contigs=8; )
TNFAIP3 ENSSSCG00000009100 8:88730620-88763504   CU655981,CH242-199N6,8:88723729-88771214
(Clone quality: bE199N6 on chr=8; Num_of_Contigs=3; )
TNFAIP3 ENSSSCG00000017091 16:69380354-69407955    
TNFAIP6 ENSSSCG00000016396 15:133961373-133969056    
TNFAIP8   ENSSSCG00000014227 2:111684514-111725863    
TNFAIP8L2 ENSSSCG00000006634 4:102048251-102048805 CU138569,CH242-265M12,4:101911025-102092543
(Clone quality: bE265M12 on chr=4; Num_of_Contigs=8; ) 		 
TNFAIP8L3   ENSSSCG00000004633 1:125746355-125787710    
TNFRSF11A ENSSSCG00000004898 1:165992452-166024819   CU234199,CH242-216F10,1:165980062-166061275
(Clone quality: bE216F10 on chr=1; Num_of_Contigs=4; )
TNFRSF16 ENSSSCG00000012528 X:81970696-81971031   FP101968,CH242-59P14,X:81955507-81971923
(Clone quality: bE59P14 on chr=X; Num_of_Contigs=3; )
TNFRSF16 ENSSSCG00000017548 12:22987595-23005905    
TNFRSF17 ENSSSCG00000007888 3:27825419-27829389   FP102753,CH242-85B21,3:27808581-27831338
(No clone quality info on )
TNFRSF18 ENSSSCG00000003330 6:42789909-42790049   FP102596,CH242-173K23,6:42789386-42793512
(Clone quality: bE173K23 on chr=6; Num_of_Contigs=10; )
TNFRSF1A ENSSSCG00000000708 5:60337243-60349834    
TNFRSF21 ENSSSCG00000001727 7:49421019-49465668    
TNFRSF4 ENSSSCG00000003331 6:42795165-42797753   FP102596,CH242-173K23,6:42793613-42821104
(Clone quality: bE173K23 on chr=6; Num_of_Contigs=10; )
TNFRSF7 ENSSSCG00000000705 5:60215579-60220962   CU633552,CH242-193I18,5:60186767-60298754
(Clone quality: bE193I18 on chr=5; Num_of_Contigs=2; )
TNFRSF8 ENSSSCG00000003437 6:49086313-49093755   FP102316,CH242-204J17,6:49079436-49098258
(Clone quality: bE204J17 on chr=6; Num_of_Contigs=9; )
TNFRSF8 ENSSSCG00000005495 1:268520497-268543333   CU466939,CH242-294C3,1:268496622-268544262
(Clone quality: bE294C3 on chr=1; Num_of_Contigs=9; )
TNFRSF9 ENSSSCG00000003386 6:46287255-46302434    
TNFSF10 ENSSSCG00000011753 13:84368606-84375337   CU582893,CH242-370P10,13:84367647-84389669
(Clone quality: bE370P10 on chr=13; Num_of_Contigs=7; )
TNFSF11 ENSSSCG00000009429 11:23440880-23475580    
TNFSF13B ENSSSCG00000009542 11:76045559-76077251    
TNFSF14 ENSSSCG00000013549 2:50037626-50041232   CU694937,CH242-71B7,2:49979846-50046985
(Clone quality: bE71B7 on chr=2; Num_of_Contigs=4; )
TNFSF18 ENSSSCG00000015487 9:108395400-108404127   FP102846,CH242-165D11,9:108331151-108415071
(Clone quality: bE165D11 on chr=9; Num_of_Contigs=5; )
TNFSF4 ENSSSCG00000015488 9:108497429-108516369    
TNFSF8 ENSSSCG00000005495 1:268520497-268543333   CU466939,CH242-294C3,1:268496622-268544262
(Clone quality: bE294C3 on chr=1; Num_of_Contigs=9; )
TNFSF9 ENSSSCG00000013544 2:49907848-49910591    
TNIP1 ENSSSCG00000017091 16:69380354-69407955    
TNIP2 ENSSSCG00000008691 8:919341-923975   CU930000,CH242-128J21,8:903580-924566
(Clone quality: bE128J21 on chr=8; Num_of_Contigs=8; )
TNIP3   ENSSSCG00000009100 8:88730620-88763504   CU655981,CH242-199N6,8:88723729-88771214
(Clone quality: bE199N6 on chr=8; Num_of_Contigs=3; )
TNK2 ENSSSCG00000011849 13:100885087-100926825 CU914410,CH242-221N4,13:100807413-100933455
(Clone quality: bE221N4 on chr=13; Num_of_Contigs=10; ) 		 
TNKS   ENSSSCG00000015851 15:52536020-52704716    
TNKS2 ENSSSCG00000010465 14:108516827-108579616   CU407271,CH242-475N15,14:108479532-108605472
(Clone quality: bE475N15 on chr=14; Num_of_Contigs=1; )
TNMD   ENSSSCG00000012480 X:75611723-75635367    
TNNC1 ENSSSCG00000011441 13:29205576-29208529   CU550676,CH242-330J9,13:29135788-29268883
(Clone quality: bE330J9 on chr=13; Num_of_Contigs=4; )
TNNC2 ENSSSCG00000007424 17:50089642-50092955   CU076086,CH242-56C16,17:49960216-50115189
(Clone quality: bE56C16 on chr=17; Num_of_Contigs=2; )
TNP1   ENSSSCG00000016179 15:112080597-112081212   CU914349,CH242-487L5,15:112073042-112094386
(Clone quality: bE487L5 on chr=15; Num_of_Contigs=9; )
TNPO2   ENSSSCG00000013726 2:55955375-55970447   CU856041,CH242-32I13,2:55919380-55991729
(Clone quality: bE32I13 on chr=2; Num_of_Contigs=2; )
TNPO3   ENSSSCG00000016572 18:17785741-17830096    
TNR ENSSSCG00000015508 9:110337587-110416513   CU694502,CH242-214B5,9:110281247-110435550
(Clone quality: bE214B5 on chr=9; Num_of_Contigs=3; )
TNRC18   ENSSSCG00000007582 3:3722522-3866012    
TNRC4   ENSSSCG00000006618 4:101467904-101482265 CU457723,CH242-28L6,4:101441264-101656496
(Clone quality: bE28L6 on chr=4; Num_of_Contigs=25; ) 		 
TNRC6B ENSSSCG00000000078 5:4332904-4376190    
TNS3   ENSSSCG00000016725 18:47632833-47816403    
TNS4   ENSSSCG00000017470 12:19744986-19781793    
TNXB ENSSSCG00000001429 7:27910968-27995163    
TOB1 ENSSSCG00000017558 12:23906392-23910614    
TOE1   ENSSSCG00000003918 6:118925598-118929196   CU657926,CH242-123A1,6:118924192-118957983
(Clone quality: bE123A1 on chr=6; Num_of_Contigs=4; )
TOM1L1 ENSSSCG00000017601 12:28744823-28760307    
TOMM20   ENSSSCG00000010158 14:57317608-57329790   CU407042,CH242-201M6,14:57298971-57336346
(Clone quality: bE201M6 on chr=14; Num_of_Contigs=3; )
TOMM20L   ENSSSCG00000005075 1:196470704-196481556   CU915422,CH242-435A1,1:196466510-196487429
(Clone quality: bE435A1 on chr=1; Num_of_Contigs=6; )
TOMM40   ENSSSCG00000003089 6:35898391-35907928   CU459172,CH242-480J10,6:35897337-35908067
(Clone quality: bE480J10 on chr=6; Num_of_Contigs=12; )
TOMM40L   ENSSSCG00000006354 4:92740196-92743622   CU606874,CH242-28G15,4:92698180-92745360
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
TOMM5   ENSSSCG00000005351 1:249731048-249735205   CU442748,CH242-379J22,1:249648117-249741421
(Clone quality: bE379J22 on chr=1; Num_of_Contigs=5; )
TOMM7   ENSSSCG00000015384 9:85733813-85743034    
TOMM70A   ENSSSCG00000011963 13:116458493-116482653    
TOP1 ENSSSCG00000007355 17:45813399-45870871   CU062531,CH242-134J5,17:45795586-45881728
(Clone quality: bE134J5 on chr=17; Num_of_Contigs=2; )
TOP1MT   ENSSSCG00000006958 4:136080586-136094999   FP085504,CH242-211G21,4:136072274-136113632
(Clone quality: bE211G21 on chr=4; Num_of_Contigs=4; )
TOP2A   ENSSSCG00000017473 12:19831692-19858974    
TOP2B   ENSSSCG00000011213 13:10342437-10397763   CU582923,CH242-318I8,13:10302635-10467629
(Clone quality: bE318I8 on chr=13; Num_of_Contigs=1; )
TOPORS ENSSSCG00000011004 10:32463622-32473371   CU928691,CH242-242E10,10:32318250-32480524
(Clone quality: bE242E10 on chr=10; Num_of_Contigs=1; )
TOR1AIP1   ENSSSCG00000015530 9:114011024-114016678    
TOR2A   ENSSSCG00000005619 1:282585093-282588896   FP102445,CH242-434F23,1:282582851-282621872
(Clone quality: bE434F23 on chr=1; Num_of_Contigs=8; )
TOR3A ENSSSCG00000015525 9:113587047-113591590    
TOX   ENSSSCG00000006235 4:76795888-76942968    
TOX3   ENSSSCG00000002835 6:22583414-22613857   CU457410,CH242-36K11,6:22572591-22709391
(Clone quality: bE36K11 on chr=6; Num_of_Contigs=2; )
TP53 ENSSSCG00000000726 5:61803651-61815808   CU457725,CH242-403B8,5:61794410-61821976
(Clone quality: bE403B8 on chr=5; Num_of_Contigs=3; )
TP53 ENSSSCG00000004153 1:27726703-27782898    
TP53 ENSSSCG00000006058 4:35169256-35201595   CU207279,CH242-480J8,4:35099646-35225473
(Clone quality: bE480J8 on chr=4; Num_of_Contigs=3; )
TP53 ENSSSCG00000007402 17:49706832-49711543   CU606851,CH242-219J22,17:49702863-49721558
(Clone quality: bE219J22 on chr=17; Num_of_Contigs=12; )
TP53 ENSSSCG00000007452 17:50969389-50972168   CU640476,CH242-377A5,17:50965070-50972897
(Clone quality: bE377A5 on chr=17; Num_of_Contigs=17; )
TP53 ENSSSCG00000009908 14:40550770-40552174    
TP53 ENSSSCG00000017950 12:49984267-49998390 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
TP53BP1 ENSSSCG00000004707 1:134068598-134101046    
TP53BP2   ENSSSCG00000010894 10:21010870-21049400    
TP53I11 ENSSSCG00000013277 2:15883298-15886932   CU861548,CH242-241H11,2:15873946-15891136
(Clone quality: bE241H11 on chr=2; Num_of_Contigs=5; )
TP53I13   ENSSSCG00000017788 12:43475935-43479656   CU463822,CH242-488A20,12:43460839-43480057
(Clone quality: bE488A20 on chr=12; Num_of_Contigs=10; )
TP53I3   ENSSSCG00000008586 3:106756959-106762368   CU928810,CH242-168M14,3:106748766-106849093
(Clone quality: bE168M14 on chr=3; Num_of_Contigs=3; )
TP53INP1   ENSSSCG00000006094 4:42100428-42107040   FP085498,CH242-18C1,4:42099477-42141852
(Clone quality: bE18C1 on chr=4; Num_of_Contigs=5; )
TP53INP2   ENSSSCG00000007283 17:40174217-40175043   CU076067,CH242-31I6,17:40109552-40175546
(Clone quality: bE31I6 on chr=17; Num_of_Contigs=2; )
TP53RK ENSSSCG00000007452 17:50969389-50972168   CU640476,CH242-377A5,17:50965070-50972897
(Clone quality: bE377A5 on chr=17; Num_of_Contigs=17; )
TP53RK ENSSSCG00000008297 3:63643304-63650784   CU463123,CH242-385I3,3:63635986-63650897
(Clone quality: bE385I3 on chr=3; Num_of_Contigs=11; )
Tp55 ENSSSCG00000000705 5:60215579-60220962   CU633552,CH242-193I18,5:60186767-60298754
(Clone quality: bE193I18 on chr=5; Num_of_Contigs=2; )
Tp55 ENSSSCG00000004891 1:165039220-165083424 CU074278,CH242-106E19,1:164951958-165118980
(Clone quality: bE106E19 on chr=1; Num_of_Contigs=1; ) 		 
TP73 ENSSSCG00000003361 6:43772690-43776772   FP102698,CH242-39I24,6:43772623-43778408
(Clone quality: bE39I24 on chr=6; Num_of_Contigs=5; )
TPBG ENSSSCG00000004458 1:88433813-88435072   CU464077,CH242-512I2,1:88412313-88539788
(Clone quality: bE512I2 on chr=1; Num_of_Contigs=3; )
TPCN1 ENSSSCG00000009879 14:39086164-39116473    
TPCN2   ENSSSCG00000012875 2:2298255-2314866   CU463344,CH242-408M2,2:2296788-2331536
(Clone quality: bE408M2 on chr=2; Num_of_Contigs=8; )
TPD52 ENSSSCG00000006156 4:58279022-58601334    
TPD52L1   ENSSSCG00000004225 1:39303578-39341538    
TPH1   ENSSSCG00000013372 2:38320971-38349071   CU467662,CH242-10M15,2:38299310-38431848
(Clone quality: bE10M15 on chr=2; Num_of_Contigs=1; )
TPI1   ENSSSCG00000000685 5:59905059-59906983   CU457492,CH242-370K21,5:59905019-59907424
(Clone quality: bE370K21 on chr=5; Num_of_Contigs=10; )
TPK1   ENSSSCG00000015462 9:105911443-106181067    
TPM1 ENSSSCG00000004570 1:112381950-112405205   CU442742,CH242-335N3,1:112355527-112431981
(Clone quality: bE335N3 on chr=1; Num_of_Contigs=5; )
TPM2 ENSSSCG00000005316 1:247494585-247502040   CU062658,CH242-97C14,1:247426659-247546707
(Clone quality: bE97C14 on chr=1; Num_of_Contigs=2; )
TPM4   ENSSSCG00000013849 2:60590061-60612089    
TPMT   ENSSSCG00000001073 7:14452994-14481617    
TPO ENSSSCG00000003947 6:120231429-120237080   CU694684,CH242-210N13,6:120225876-120239718
(Clone quality: bE210N13 on chr=6; Num_of_Contigs=11; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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