A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 10901 - 11000:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
SLC38A1   ENSSSCG00000000807 5:72756983-72802292    
SLC38A11   ENSSSCG00000015903 15:66699517-66805310    
SLC38A5   ENSSSCG00000011397 13:27284676-27360380    
SLC38A6   ENSSSCG00000005092 1:198767132-198997120    
SLC38A7   ENSSSCG00000002798 6:19161086-19167134   FP103045,CH242-261E8,6:19158775-19167395
(Clone quality: bE261E8 on chr=6; Num_of_Contigs=12; )
SLC38A8   ENSSSCG00000002683 6:3147432-3158701    
SLC38A9   ENSSSCG00000016914 16:32502823-32524980    
SLC39A1   ENSSSCG00000006561 4:99770504-99961017    
SLC39A11   ENSSSCG00000017250 12:5949691-6369897    
SLC39A12   ENSSSCG00000011039 10:42402676-42482357   CU466345,CH242-21O2,10:42375729-42509794
(Clone quality: bE21O2 on chr=10; Num_of_Contigs=6; )
SLC39A13   ENSSSCG00000013238 2:13279591-13287617   CU856312,CH242-38I7,2:13257671-13307229
(Clone quality: bE38I7 on chr=2; Num_of_Contigs=10; )
SLC39A14 ENSSSCG00000009623 14:6592445-6636672    
SLC39A3   ENSSSCG00000013466 2:47374804-47378801   CU972376,CH242-107L7,2:47367584-47461889
(Clone quality: bE107L7 on chr=2; Num_of_Contigs=6; )
SLC39A5 ENSSSCG00000000385 5:20553964-20559810    
SLC39A7 ENSSSCG00000001475 7:29618573-29623114 CT737383,CH242-215D15,7:29573904-29764538
(Clone quality: bE215D15 on chr=7; Num_of_Contigs=3; ) 		 
SLC39A8   ENSSSCG00000009169 8:101810629-101881059    
SLC39A9   ENSSSCG00000002308 7:101480589-101534040    
SLC41A2   ENSSSCG00000000838 5:74641792-74753405    
SLC41A3   ENSSSCG00000001825 7:59213778-59236583 CT868688,CH242-510G16,7:59026976-59242142
(Clone quality: bE510G16 on chr=7; Num_of_Contigs=3; ) 		 
SLC44A1 ENSSSCG00000005425 1:258582618-258743259    
SLC44A2   ENSSSCG00000013639 2:52870113-52884576   CU993813,CH242-86K24,2:52867551-52887632
(Clone quality: bE86K24 on chr=2; Num_of_Contigs=13; )
SLC44A3   ENSSSCG00000006888 4:127222668-127250529   CU639441,CH242-134D14,4:127222495-127252056
(Clone quality: bE134D14 on chr=4; Num_of_Contigs=7; )
SLC44A4   ENSSSCG00000001419 7:27780863-27799469 CT956038,CH242-183N12,7:27767223-27953076
(Clone quality: bE183N12 on chr=7; Num_of_Contigs=3; ) 		 
SLC44A5   ENSSSCG00000003777 6:96184582-96587176    
SLC45A1   ENSSSCG00000003388 6:46557968-46567233    
SLC45A2   ENSSSCG00000016821 16:17474432-17515063    
SLC45A4   ENSSSCG00000005930 4:1504395-1512140   CU407190,CH242-272D18,4:1451678-1513192
(Clone quality: bE272D18 on chr=4; Num_of_Contigs=7; )
SLC46A2   ENSSSCG00000005472 1:266470013-266480023   CU041260,CH242-55A14,1:266438281-266562122
(Clone quality: bE55A14 on chr=1; Num_of_Contigs=9; )
SLC46A3   ENSSSCG00000009322 11:5500231-5512141    
SLC47A2   ENSSSCG00000018042 12:56543310-56558075   FP003595,CH242-47E22,12:56532412-56616940
(Clone quality: bE47E22 on chr=12; Num_of_Contigs=5; )
SLC4A1 ENSSSCG00000017358 12:16859433-16871908   CU468984,CH242-216D12,12:16857125-16875764
(Clone quality: bE216D12 on chr=12; Num_of_Contigs=22; )
SLC4A10   ENSSSCG00000015893 15:63699776-63849448    
SLC4A11   ENSSSCG00000007157 17:34036888-34039016   CU468064,CH242-324C22,17:34036789-34040301
(Clone quality: bE324C22 on chr=17; Num_of_Contigs=12; )
SLC4A1AP   ENSSSCG00000008549 3:104219266-104246958    
SLC4A4   ENSSSCG00000008943 8:57822775-57933935    
SLC4A7   ENSSSCG00000011218 13:11801566-11867043   CU914223,CH242-127D6,13:11796471-11874648
(Clone quality: bE127D6 on chr=13; Num_of_Contigs=9; )
SLC4A9   ENSSSCG00000014363 2:129139579-129148110   CU466537,CH242-391J6,2:129139556-129188804
(Clone quality: bE391J6 on chr=2; Num_of_Contigs=9; )
SLC5A10   ENSSSCG00000018048 12:56737097-56752276   FP074851,CH242-203F20,12:56719312-56755196
(Clone quality: bE203F20 on chr=12; Num_of_Contigs=16; )
SLC5A11   ENSSSCG00000007828 3:20063518-20068150   FP236382,CH242-23G12,3:20061719-20069971
(Clone quality: bE23G12 on chr=3; Num_of_Contigs=30; )
SLC5A12   ENSSSCG00000013338 2:31544295-31593706 CU468572,CH242-524G2,2:31513128-31727078
(Clone quality: bE524G2 on chr=2; Num_of_Contigs=6; ) 		 
SLC5A4   ENSSSCG00000010039 14:49670401-49703815   CU468977,CH242-158O5,14:49653560-49846294
(Clone quality: bE158O5 on chr=14; Num_of_Contigs=1; )
SLC5A5   ENSSSCG00000013890 2:62125473-62141196   CU463003,CH242-317A24,2:62084905-62151709
(Clone quality: bE317A24 on chr=2; Num_of_Contigs=2; )
SLC5A6   ENSSSCG00000008550 3:104359765-104366796   CU896571,CH242-143O19,3:104350462-104376227
(Clone quality: bE143O19 on chr=3; Num_of_Contigs=6; )
SLC5A7   ENSSSCG00000008140 3:43066041-43089484   CU469416,CH242-209K6,3:43058692-43135972
(Clone quality: bE209K6 on chr=3; Num_of_Contigs=7; )
SLC5A9   ENSSSCG00000003882 6:116965263-116976571    
SLC6A1   ENSSSCG00000011577 13:56263117-56280465   CU633270,CH242-296G12,13:56249224-56284781
(Clone quality: bE296G12 on chr=13; Num_of_Contigs=16; )
SLC6A12   ENSSSCG00000000749 5:63418324-63553345    
SLC6A15   ENSSSCG00000000936 5:92051099-92076522    
SLC6A17 ENSSSCG00000006811 4:114370350-114521126    
SLC6A18   ENSSSCG00000017117 16:76728665-76737159   FP236205,CH242-148J9,16:76728115-76737983
(Clone quality: bE148J9 on chr=16; Num_of_Contigs=7; )
SLC6A19   ENSSSCG00000017120 16:76870469-76879899    
SLC6A2 ENSSSCG00000002827 6:20697214-20742549    
SLC6A3   ENSSSCG00000017121 16:76880421-76905242    
SLC6A4 ENSSSCG00000017797 12:44316246-44341563    
SLC6A5   ENSSSCG00000013346 2:36165220-36215222    
SLC6A6   ENSSSCG00000011600 13:58354069-58386637   CU633920,CH242-163H4,13:58353853-58390772
(Clone quality: bE163H4 on chr=13; Num_of_Contigs=6; )
SLC6A8   ENSSSCG00000012771 X:122474553-122477223   FP245398,CH242-390A7,X:122474466-122509200
(Clone quality: bE390A7 on chr=X; Num_of_Contigs=13; )
SLC7A1   ENSSSCG00000009324 11:6079920-6092468    
SLC7A10   ENSSSCG00000002864 6:28694053-28708979   CU638683,CH242-3F10,6:28679939-28721948
(Clone quality: bE3F10 on chr=6; Num_of_Contigs=8; )
SLC7A14   ENSSSCG00000011748 13:83158119-83211761   CU928383,CH242-276A6,13:83144715-83238970
(Clone quality: bE276A6 on chr=13; Num_of_Contigs=3; )
SLC7A2   ENSSSCG00000006987 17:5032161-5053065   CU682348,CH242-166L11,17:5021825-5054296
(Clone quality: bE166L11 on chr=17; Num_of_Contigs=5; )
SLC7A4   ENSSSCG00000010102 14:51729892-51989336    
SLC7A6OS   ENSSSCG00000002766 6:12771811-12772415   CU929721,CH242-222H7,6:12770760-12775439
(Clone quality: bE222H7 on chr=6; Num_of_Contigs=27; )
SLC7A7   ENSSSCG00000002041 7:82432218-82469416   CT737318,CH242-17H24,7:82408265-82613937
(Clone quality: bE17H24 on chr=7; Num_of_Contigs=1; )
SLC7A8   ENSSSCG00000002032 7:82233276-82298502    
SLC8A2 ENSSSCG00000003117 6:37015039-37017329 FP104555,CH242-158J7,6:37001645-37018015
(Clone quality: bE158J7 on chr=6; Num_of_Contigs=11; ) 		 
SLC8A3   ENSSSCG00000002315 7:102030197-102160111    
SLC9A1   ENSSSCG00000003569 6:58042526-58095232   FP067355,CH242-106I19,6:57995161-58172236
(Clone quality: bE106I19 on chr=6; Num_of_Contigs=1; )
SLC9A11   ENSSSCG00000015489 9:108751341-108776682    
SLC9A2   ENSSSCG00000008152 3:46980500-46997106   CU928772,CH242-100B10,3:46950462-47008341
(Clone quality: bE100B10 on chr=3; Num_of_Contigs=3; )
SLC9A3R1   ENSSSCG00000017232 12:4689210-4706638 CU928524,CH242-307O4,12:4671735-4885844
(Clone quality: bE307O4 on chr=12; Num_of_Contigs=13; ) 		 
SLC9A3R2   ENSSSCG00000008038 3:36396774-36407197    
SLC9A4   ENSSSCG00000008155 3:47236978-47299269    
SLC9A5   ENSSSCG00000002783 6:13311218-13329653   CU929920,CH242-351A16,6:13258514-13336829
(Clone quality: bE351A16 on chr=6; Num_of_Contigs=8; )
SLC9A6   ENSSSCG00000012698 X:109312988-109367081    
SLC9A8   ENSSSCG00000007466 17:53559298-53649678    
SLC9A9   ENSSSCG00000011686 13:68693577-69014869    
SLCO1A2   ENSSSCG00000000584 5:50079369-50104219    
SLCO1C1   ENSSSCG00000000585 5:50249353-50313886    
SLCO2A1 ENSSSCG00000011641 13:61551165-61561230    
SLCO2B1 ENSSSCG00000014851 9:9179857-9211105   CU655994,CH242-280C8,9:9168027-9211748
(Clone quality: bE280C8 on chr=9; Num_of_Contigs=8; )
SLCO3A1   ENSSSCG00000002263 7:95127584-95461543    
SLCO4C1   ENSSSCG00000014182 2:97104196-97173621    
SLCO5A1   ENSSSCG00000006196 4:67622110-67623120   CU469122,CH242-149H11,4:67565490-67670950
(Clone quality: bE149H11 on chr=4; Num_of_Contigs=3; )
SLCO6A1   ENSSSCG00000014183 2:97208582-97304608   CU468184,CH242-358L10,2:97161075-97360084
(Clone quality: bE358L10 on chr=2; Num_of_Contigs=1; )
SLFN14   ENSSSCG00000017714 12:37759442-37763843   CU927946,CH242-204J8,12:37724810-37778976
(Clone quality: bE204J8 on chr=12; Num_of_Contigs=6; )
SLFNL1   ENSSSCG00000003972 6:121590069-121593877   FP016067,CH242-126M8,6:121551012-121676967
(Clone quality: bE126M8 on chr=6; Num_of_Contigs=2; )
SLIT1   ENSSSCG00000010512 14:113517455-113533607    
SLIT2 ENSSSCG00000008749 8:11826140-12034965    
SLIT2 ENSSSCG00000017012 16:52336708-52500738    
SLIT3   ENSSSCG00000017012 16:52336708-52500738    
SLITRK1   ENSSSCG00000009485 11:54663728-54665815   CU076063,CH242-147M6,11:54628405-54818872
(Clone quality: bE147M6 on chr=11; Num_of_Contigs=1; )
SLITRK2   ENSSSCG00000012724 X:117051445-117053994   FP236785,CH242-290N8,X:117047570-117079327
(Clone quality: bE290N8 on chr=X; Num_of_Contigs=3; )
SLITRK3   ENSSSCG00000011736 13:80533004-80535943   CU466936,CH242-212H8,13:80516212-80655818
(Clone quality: bE212H8 on chr=13; Num_of_Contigs=1; )
SLITRK5   ENSSSCG00000009488 11:57924059-57926890    
SLITRK6   ENSSSCG00000009486 11:56414187-56416715   CU466998,CH242-71N16,11:56411659-56425726
(Clone quality: bE71N16 on chr=11; Num_of_Contigs=7; )
SLK   ENSSSCG00000010606 14:120006006-120060599   CT737145,CH242-23L13,14:119925154-120085579
(Clone quality: bE23L13 on chr=14; Num_of_Contigs=1; )
SLMAP   ENSSSCG00000011468 13:33188707-33331374    
SLMO2   ENSSSCG00000007525 17:61793431-61801869 CR956646,CH242-247L10,17:61655968-61825296
(No clone quality info on bE247L10) 		 
SLPI ENSSSCG00000007388 17:49357587-49360172   CU606931,CH242-44K10,17:49351128-49369311
(Clone quality: bE44K10 on chr=17; Num_of_Contigs=16; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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