A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 901 - 1000:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
ATP7A ENSSSCG00000012437 X:61503350-61559001   CU638862,CH242-477H4,X:61460262-61598813
(Clone quality: bE477H4 on chr=X; Num_of_Contigs=10; )
ATP7B   ENSSSCG00000009382 11:15970505-15991591    
ATP8A1   ENSSSCG00000008803 8:28268621-28397410   CU694821,CH242-147I10,8:28261291-28427575
(Clone quality: bE147I10 on chr=8; Num_of_Contigs=1; )
ATP8B1   ENSSSCG00000004921 1:169967760-170093696    
ATP8B2   ENSSSCG00000006550 4:99455658-99474350   CU856218,CH242-277E7,4:99454245-99496470
(Clone quality: bE277E7 on chr=4; Num_of_Contigs=4; )
ATP8B3   ENSSSCG00000013440 2:46750854-46771652    
ATP8B4   ENSSSCG00000004646 1:126930123-127186765    
ATP9A ENSSSCG00000007478 17:55130213-55266427 CR956386,CH242-152A8,17:55100652-55296226
(No clone quality info on bE152A8) 		 
ATPAF1   ENSSSCG00000003896 6:117900015-117930641    
ATPBD4   ENSSSCG00000004798 1:142987385-142998128    
ATPDase ENSSSCG00000010497 14:112352301-112444933    
ATPGD1   ENSSSCG00000012911 2:3478706-3484319   CU633429,CH242-6G2,2:3468458-3486670
(Clone quality: bE6G2 on chr=2; Num_of_Contigs=8; )
ATR ENSSSCG00000008340 3:67221163-67472877    
ATR ENSSSCG00000011359 13:26222012-26276478    
ATR ENSSSCG00000011679 13:67779632-67893995    
ATRIP   ENSSSCG00000011359 13:26222012-26276478    
ATRN ENSSSCG00000007153 17:33644913-33827182    
ATRNL1 ENSSSCG00000010654 14:131290888-131394587    
ATRX ENSSSCG00000012434 X:61253243-61288334    
ATXN1   ENSSSCG00000001065 7:12735377-12753517   CU468874,CH242-275A4,7:12717108-12821991
(Clone quality: bE275A4 on chr=7; Num_of_Contigs=3; )
ATXN10   ENSSSCG00000000008 5:259205-283748    
ATXN1L   ENSSSCG00000002742 6:10521385-10523127   CU467029,CH242-364E21,6:10516296-10523128
(Clone quality: bE364E21 on chr=6; Num_of_Contigs=16; )
ATXN2   ENSSSCG00000009834 14:32715334-32822512    
ATXN3L   ENSSSCG00000002446 7:121629762-121662799    
ATXN7   ENSSSCG00000011493 13:38259487-38347868    
ATXN7L1   ENSSSCG00000015432 9:98552552-98821154    
ATXN7L2   ENSSSCG00000006828 4:115153903-115161433   CU633714,CH242-413N19,4:115147581-115211057
(Clone quality: bE413N19 on chr=4; Num_of_Contigs=4; )
ATXN7L3   ENSSSCG00000017362 12:16962534-16966022   CU469063,CH242-86P22,12:16960337-16967826
(Clone quality: bE86P22 on chr=12; Num_of_Contigs=21; )
AUH   ENSSSCG00000009590 14:2911107-2922187    
AUP1   ENSSSCG00000008268 3:62908683-62911497    
AUTS2   ENSSSCG00000007727 3:13043061-13068644    
AVEN ENSSSCG00000002247 7:88195236-88229559   CU633891,CH242-195C13,7:88161233-88310281
(Clone quality: bE195C13 on chr=7; Num_of_Contigs=3; )
AVP   ENSSSCG00000007163 17:34153617-34155563   CU302217,CH242-196N9,17:34148660-34159474
(Clone quality: bE196N9 on chr=17; Num_of_Contigs=10; )
AVPR1A ENSSSCG00000000459 5:27413378-27500016    
AVPR1B   ENSSSCG00000015639 9:131030250-131034023   CU855983,CH242-166L15,9:130999751-131128008
(Clone quality: bE166L15 on chr=9; Num_of_Contigs=2; )
AVPR2   ENSSSCG00000012789 X:122750024-122752424   CU915581,CH242-139K22,X:122729751-122810838
(Clone quality: bE139K22 on chr=X; Num_of_Contigs=13; )
AXIN2   ENSSSCG00000017265 12:10334242-10337719    
AXL ENSSSCG00000003005 6:33860521-33914906    
AZGP1 ENSSSCG00000007642 3:6241086-6248437   FP102393,CH242-6M17,3:6222987-6313567
(Clone quality: bE6M17 on chr=3; Num_of_Contigs=3; )
AZI1   ENSSSCG00000017143 12:857667-860904   CU993801,CH242-26A11,12:857666-865196
(Clone quality: bE26A11 on chr=12; Num_of_Contigs=7; )
AZI2   ENSSSCG00000011220 13:12455576-12464784   CU856671,CH242-489B14,13:12454758-12470463
(Clone quality: bE489B14 on chr=13; Num_of_Contigs=16; )
AZU1 ENSSSCG00000013415 2:46124133-46126990   FP015903,CH242-504E7,2:46123296-46128259
(Clone quality: bE504E7 on chr=2; Num_of_Contigs=12; )
B29 ENSSSCG00000004521 1:103561675-103584829    
B29 ENSSSCG00000017283 12:12626857-12630260   CU466386,CH242-271O11,12:12583385-12667411
(Clone quality: bE271O11 on chr=12; Num_of_Contigs=5; )
B2M ENSSSCG00000004682 1:132684316-132690961   CU640392,CH242-218F20,1:132673358-132786983
(Clone quality: bE218F20 on chr=1; Num_of_Contigs=3; )
B2M ENSSSCG00000004687 1:132812013-132896242    
B2R ENSSSCG00000002500 7:126331175-126332251   CU928480,CH242-520I18,7:126321577-126345667
(Clone quality: bE520I18 on chr=7; Num_of_Contigs=25; )
B3GALNT2   ENSSSCG00000010153 14:56972147-56991239   CT978605,CH242-112N20,14:56970257-56992766
(Clone quality: bE112N20 on chr=14; Num_of_Contigs=7; )
B3GALT1   ENSSSCG00000015918 15:69949751-69950731   CU595477,CH242-250N19,15:69947535-69957671
(Clone quality: bE250N19 on chr=15; Num_of_Contigs=11; )
B3GALT2   ENSSSCG00000010800 10:1528452-1529720   CU929655,CH242-497M20,10:1526778-1531182
(Clone quality: bE497M20 on chr=10; Num_of_Contigs=12; )
B3GALT4   ENSSSCG00000001503 7:34050866-34051999 CU607018,CH242-138E20,7:33930957-34116846
(Clone quality: bE138E20 on chr=7; Num_of_Contigs=1; ) 		 
B3GALT5   ENSSSCG00000012070 13:143260587-143261522   CU929841,CH242-58D24,13:143237842-143271306
(Clone quality: bE58D24 on chr=13; Num_of_Contigs=4; )
B3GALTL   ENSSSCG00000009335 11:7292515-7475340    
B3GAT1 ENSSSCG00000015259 9:59287480-59384534    
B3GAT2 ENSSSCG00000004277 1:53353380-53451632    
B3GNT1   ENSSSCG00000008374 3:73228974-73230080    
B3GNT3   ENSSSCG00000013886 2:62071027-62074197   CU928970,CH242-349K2,2:62018597-62084904
(Clone quality: bE349K2 on chr=2; Num_of_Contigs=3; )
B3GNT4   ENSSSCG00000009798 14:30629389-30630042   CU468822,CH242-327O18,14:30629387-30651966
(Clone quality: bE327O18 on chr=14; Num_of_Contigs=28; )
B3GNT6   ENSSSCG00000014874 9:11052945-11054084   FP089538,CH242-169J5,9:11052820-11057530
(Clone quality: bE169J5 on chr=9; Num_of_Contigs=5; )
B3GNT7   ENSSSCG00000016274 15:124438865-124440070   CU856676,CH242-83A8,15:124433170-124442074
(Clone quality: bE83A8 on chr=15; Num_of_Contigs=8; )
B3GNT8   ENSSSCG00000003008 6:33941820-33943013   FP236582,CH242-238L13,6:33921264-33956509
(Clone quality: bE238L13 on chr=6; Num_of_Contigs=11; )
B4GALT1   ENSSSCG00000010998 10:31842477-31900995    
B4GALT3   ENSSSCG00000006360 4:92786900-92792768   CU606874,CH242-28G15,4:92745461-92814223
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
B4GALT5   ENSSSCG00000007465 17:53457297-53530713    
B4GALT7   ENSSSCG00000014035 2:69591958-69602544 FP067372,CH242-220F6,2:69483795-69614393
(Clone quality: bE220F6 on chr=2; Num_of_Contigs=8; ) 		 
B7-H3 ENSSSCG00000001917 7:65153991-65183019   CU137731,CH242-449C4,7:65113175-65198803
(Clone quality: bE449C4 on chr=7; Num_of_Contigs=5; )
B7-H4 ENSSSCG00000006731 4:107621872-107690212   CU207228,CH242-366F10,4:107617782-107740116
(Clone quality: bE366F10 on chr=4; Num_of_Contigs=2; )
B7H3 ENSSSCG00000001917 7:65153991-65183019   CU137731,CH242-449C4,7:65113175-65198803
(Clone quality: bE449C4 on chr=7; Num_of_Contigs=5; )
B9D2   ENSSSCG00000003013 6:34055717-34061260    
BAALC   ENSSSCG00000006053 4:34273811-34363456    
BAAT   ENSSSCG00000005398 1:254770032-254774282   CU469282,CH242-469F7,1:254763320-254778964
(Clone quality: bE469F7 on chr=1; Num_of_Contigs=22; )
BACE1   ENSSSCG00000015079 9:43560055-43579984    
BACE2   ENSSSCG00000012074 13:144159699-144222529    
BACH1   ENSSSCG00000012029 13:137187096-137224463   CU640452,CH242-251G20,13:137179154-137224693
(Clone quality: bE251G20 on chr=13; Num_of_Contigs=5; )
BACH2 ENSSSCG00000004332 1:61013836-61027925    
BAD ENSSSCG00000013033 2:6217555-6228600    
BAG1 ENSSSCG00000010996 10:31752865-31765753    
BAG3 ENSSSCG00000010686 14:135493542-135516967   CT826370,CH242-151G12,14:135430149-135546133
(Clone quality: bE151G12 on chr=14; Num_of_Contigs=3; )
BAG4 ENSSSCG00000015817 15:45762923-45773350   CU570721,CH242-1H2,15:45760716-45803992
(Clone quality: bE1H2 on chr=15; Num_of_Contigs=6; )
BAGE2   ENSSSCG00000016429 18:4251169-4371122    
BAHD1   ENSSSCG00000004772 1:137318532-137325210   CU234165,CH242-252B18,1:137235363-137339770
(Clone quality: bE252B18 on chr=1; Num_of_Contigs=2; )
BAI1 ENSSSCG00000000111 5:6283965-6303901    
BAI1 ENSSSCG00000007602 3:4666274-4688695    
BAI1 ENSSSCG00000008029 3:36212736-36222212   CU467714,CH242-272G6,3:36207929-36224650
(Clone quality: bE272G6 on chr=3; Num_of_Contigs=16; )
BAI1 ENSSSCG00000011497 13:39290222-39403689    
BAI1 ENSSSCG00000017142 12:785777-798275    
BAI2   ENSSSCG00000003604 6:60551753-60582291    
BAIAP2   ENSSSCG00000017142 12:785777-798275    
BAIAP2L1   ENSSSCG00000007602 3:4666274-4688695    
BAIAP2L2   ENSSSCG00000000111 5:6283965-6303901    
BAIAP3   ENSSSCG00000008029 3:36212736-36222212   CU467714,CH242-272G6,3:36207929-36224650
(Clone quality: bE272G6 on chr=3; Num_of_Contigs=16; )
BAK1 ENSSSCG00000001516 7:34217587-34222793 CU498854,CH242-216B14,7:34138678-34237511
(Clone quality: bE216B14 on chr=7; Num_of_Contigs=6; ) 		 
BAMBI ENSSSCG00000011014 10:38182802-38188343   CU570822,CH242-194F17,10:38182328-38219225
(Clone quality: bE194F17 on chr=10; Num_of_Contigs=3; )
BANF1   ENSSSCG00000012961 2:4706155-4708016   CU694743,CH242-58A13,2:4689745-4721432
(Clone quality: bE58A13 on chr=2; Num_of_Contigs=2; )
BANF2   ENSSSCG00000007087 17:26761654-26806456    
BAP1   ENSSSCG00000011438 13:29159707-29167575   CU550676,CH242-330J9,13:29135788-29268883
(Clone quality: bE330J9 on chr=13; Num_of_Contigs=4; )
BARD1 ENSSSCG00000016170 15:110185523-110268008    
BARHL1   ENSSSCG00000005730 1:288108201-288115592    
BARHL2   ENSSSCG00000006914 4:130224667-130229439    
BARX1 ENSSSCG00000008081 3:38364296-38367788   FP102259,CH242-507E20,3:38318964-38457094
(Clone quality: bE507E20 on chr=3; Num_of_Contigs=3; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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