A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
ENTPD7 ENSSSCG00000010540 14:115591227-115633463    
ENTPD7 location ⇒ 14:115607968-115608121   CT868685,CH242-211E15,14:115597313-115736638
(Clone quality: bE211E15 on chr=14; Num_of_Contigs=2; )
ENTPD7 location ⇒ 14:115613270-115613377   CT868685,CH242-211E15,14:115597313-115736638
(Clone quality: bE211E15 on chr=14; Num_of_Contigs=2; )
ENTPD7 location ⇒ 14:115619072-115619207   CT868685,CH242-211E15,14:115597313-115736638
(Clone quality: bE211E15 on chr=14; Num_of_Contigs=2; )
ENTPD7 location ⇒ 14:115624244-115624416   CT868685,CH242-211E15,14:115597313-115736638
(Clone quality: bE211E15 on chr=14; Num_of_Contigs=2; )
ENTPD8   ENSSSCG00000005852 1:294383279-294385930   CU928955,CH242-34I15,1:294362331-294386055
(Clone quality: bE34I15 on chr=1; Num_of_Contigs=4; )
EOMES ENSSSCG00000011219 13:12091651-12096759   CU856573,CH242-205I10,13:12059023-12109997
(Clone quality: bE205I10 on chr=13; Num_of_Contigs=13; )
EP300 ENSSSCG00000000068 5:3703225-3761606   CU407312,CH242-137N12,5:3682722-3817049
(Clone quality: bE137N12 on chr=5; Num_of_Contigs=3; )
EP300 ENSSSCG00000004656 1:128158234-128158809   CU487207,CH242-124K24,1:128087979-128160574
(Clone quality: bE124K24 on chr=1; Num_of_Contigs=4; )
EP300 location ⇒ 5:3738062-3738199   CU407312,CH242-137N12,5:3682722-3817049
(Clone quality: bE137N12 on chr=5; Num_of_Contigs=3; )
EP300 location ⇒ 5:3745216-3745463   CU407312,CH242-137N12,5:3682722-3817049
(Clone quality: bE137N12 on chr=5; Num_of_Contigs=3; )
EP300 location ⇒ 5:3746619-3746734   CU407312,CH242-137N12,5:3682722-3817049
(Clone quality: bE137N12 on chr=5; Num_of_Contigs=3; )
EP300 location ⇒ 5:3747900-3748090   CU407312,CH242-137N12,5:3682722-3817049
(Clone quality: bE137N12 on chr=5; Num_of_Contigs=3; )
EP400NL   ENSSSCG00000009743 14:23364698-23370578   CU469318,CH242-114E11,14:23358536-23372137
(Clone quality: bE114E11 on chr=14; Num_of_Contigs=2; )
EPAS1   ENSSSCG00000008443 3:87502103-87601420    
EPB41   ENSSSCG00000003586 6:58839429-58911791    
EPB41L2   ENSSSCG00000004199 1:33720923-33830966    
EPB41L3 ENSSSCG00000003687 6:69432777-69568435    
EPB41L3 location ⇒ 6:69539427-69539207   CU640370,CH242-12M21,6:69516590-69570787
(Clone quality: bE12M21 on chr=6; Num_of_Contigs=2; )
EPB41L3 location ⇒ 6:69539887-69539796   CU640370,CH242-12M21,6:69516590-69570787
(Clone quality: bE12M21 on chr=6; Num_of_Contigs=2; )
EPB41L3 location ⇒ 6:69545229-69545075   CU640370,CH242-12M21,6:69516590-69570787
(Clone quality: bE12M21 on chr=6; Num_of_Contigs=2; )
EPB41L3 location ⇒ 6:69551032-69550933   CU640370,CH242-12M21,6:69516590-69570787
(Clone quality: bE12M21 on chr=6; Num_of_Contigs=2; )
EPB41L4A   ENSSSCG00000014209 2:106206864-106334575    
EPB41L4B   ENSSSCG00000005446 1:262953642-262997134    
EPB41L5   ENSSSCG00000015744 15:29737655-29835347    
EPB42 ENSSSCG00000004714 1:134383649-134404828   CU041269,CH242-35N12,1:134381341-134411075
(Clone quality: bE35N12 on chr=1; Num_of_Contigs=12; )
EPB49   ENSSSCG00000009613 14:6289454-6307086   CT737273,CH242-75B21,14:6289244-6343920
(Clone quality: bE75B21 on chr=14; Num_of_Contigs=4; )
EPC1   ENSSSCG00000011028 10:41231363-41261769   CU929874,CH242-171L18,10:41159799-41268628
(Clone quality: bE171L18 on chr=10; Num_of_Contigs=3; )
EPC2   ENSSSCG00000015665 15:72347-177134    
EPCAM ENSSSCG00000008429 3:86465630-86481328   CU928288,CH242-3M15,3:86465591-86482117
(Clone quality: bE3M15 on chr=3; Num_of_Contigs=9; )
EPDR1 ENSSSCG00000015449 9:101320986-101322519   FP085583,CH242-236M23,9:101315141-101326310
(Clone quality: bE236M23 on chr=9; Num_of_Contigs=15; )
EPDR1 location ⇒ 9:101320986-101321196   FP085583,CH242-236M23,9:101315141-101326310
(Clone quality: bE236M23 on chr=9; Num_of_Contigs=15; )
EPDR1 location ⇒ 9:101322326-101322660   FP085583,CH242-236M23,9:101315141-101326310
(Clone quality: bE236M23 on chr=9; Num_of_Contigs=15; )
EPDR1 location ⇒ 9:101322686-101322755   FP085583,CH242-236M23,9:101315141-101326310
(Clone quality: bE236M23 on chr=9; Num_of_Contigs=15; )
EPGN   ENSSSCG00000008964 8:59816501-59820475    
EPHA1   ENSSSCG00000016459 18:5760902-5778284   CU929961,CH242-59I9,18:5712406-5783203
(Clone quality: bE59I9 on chr=18; Num_of_Contigs=6; )
EPHA2   ENSSSCG00000003471 6:51663889-51690404    
EPHA4   ENSSSCG00000016230 15:116370698-116462093    
EPHA5 ENSSSCG00000008919 8:54720225-54788090    
EPHA6   ENSSSCG00000011991 13:119761209-119918482    
EPHA7   ENSSSCG00000004336 1:64005850-64180194    
EPHA8   ENSSSCG00000003523 6:55534568-55554037    
EPHB1 ENSSSCG00000011647 13:62448832-62468599    
EPHB1 location ⇒ 13:62448900-62448834   CU463888,CH242-395L12,13:62401105-62455208
(Clone quality: bE395L12 on chr=13; Num_of_Contigs=9; )
EPHB1 location ⇒ 13:62468147-62467467   CU633678,CH242-249N16,13:62466950-62485472
(Clone quality: bE249N16 on chr=13; Num_of_Contigs=6; )
EPHB1 location ⇒ 13:92562791-92562855   FP236536,CH242-57J21,13:92555907-92566849
(Clone quality: bE57J21 on chr=13; Num_of_Contigs=12; )
EPHB2   ENSSSCG00000003527 6:55709254-55873917    
EPHB3 ENSSSCG00000011785 13:92562334-92564464   FP236536,CH242-57J21,13:92555907-92566849
(Clone quality: bE57J21 on chr=13; Num_of_Contigs=12; )
EPHB3 location ⇒ 13:92658132-92657989   FP236536,CH242-57J21,13:92648587-92659732
(Clone quality: bE57J21 on chr=13; Num_of_Contigs=12; )
EPHB3 location ⇒ 13:92658425-92658232   FP236536,CH242-57J21,13:92648587-92659732
(Clone quality: bE57J21 on chr=13; Num_of_Contigs=12; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-29

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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