A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
SNORA21   ENSSSCG00000019926 3:62392188-62392323   FP102740,CH242-68D9,3:62370570-62410509
(Clone quality: bE68D9 on chr=3; Num_of_Contigs=3; )
SNORA22   ENSSSCG00000018553 3:15391360-15391494   FP102600,CH242-175H12,3:15384203-15404341
(Clone quality: bE175H12 on chr=3; Num_of_Contigs=9; )
SNORA22   ENSSSCG00000019782 5:56802460-56802592   FP236640,CH242-517N8,5:56802341-56823315
(Clone quality: bE517N8 on chr=5; Num_of_Contigs=3; )
SNORA24   ENSSSCG00000018373 8:90776796-90776926   CU570724,CH242-203K14,8:90680257-90831171
(Clone quality: bE203K14 on chr=8; Num_of_Contigs=1; )
SNORA25   ENSSSCG00000019648 9:26392912-26393038   CU694898,CH242-364L8,9:26392035-26401420
(Clone quality: bE364L8 on chr=9; Num_of_Contigs=25; )
SNORA25   ENSSSCG00000019628 15:66148105-66148231   CU595527,CH242-319M13,15:66145494-66151358
(Clone quality: bE319M13 on chr=15; Num_of_Contigs=23; )
SNORA25   ENSSSCG00000018795 14:5247615-5247743   CU640477,CH242-380D10,14:5231614-5251181
(Clone quality: bE380D10 on chr=14; Num_of_Contigs=12; )
SNORA26   ENSSSCG00000019800 4:42725230-42725350   FP067354,CH242-105K3,4:42708053-42739421
(Clone quality: bE105K3 on chr=4; Num_of_Contigs=13; )
SNORA27   ENSSSCG00000019952 7:44939969-44940088 CR974460,PigE-150I6,7:44863153-44985314
(No clone quality info on bT150I6) 		 
SNORA27   ENSSSCG00000019886 15:130905710-130905829   CU928880,CH242-126P3,15:130902106-130907347
(Clone quality: bE126P3 on chr=15; Num_of_Contigs=15; )
SNORA27   ENSSSCG00000019590 11:3809403-3809530   CU695218,CH242-446F1,11:3807937-3812843
(Clone quality: bE446F1 on chr=11; Num_of_Contigs=21; )
SNORA27   ENSSSCG00000019296 13:94158498-94158620   CU633961,CH242-82L2,13:94145951-94228460
(Clone quality: bE82L2 on chr=13; Num_of_Contigs=4; )
SNORA27   ENSSSCG00000019030 7:44783970-44784089   CU928765,CH242-349L1,7:44716402-44811319
(Clone quality: bE349L1 on chr=7; Num_of_Contigs=5; )
SNORA28   ENSSSCG00000019544 8:14899-15015   FP102972,CH242-47L5,8:11639-17297
(Clone quality: bE47L5 on chr=8; Num_of_Contigs=13; )
SNORA29   ENSSSCG00000018244 13:135193133-135193271   CU855845,CH242-276F6,13:135189306-135210407
(Clone quality: bE276F6 on chr=13; Num_of_Contigs=20; )
SNORA29   ENSSSCG00000018530 1:8720492-8720631 CU855864,CH242-178J19,1:8688737-8737378
(Clone quality: bE178J19 on chr=1; Num_of_Contigs=11; ) 		 
SNORA3   ENSSSCG00000018343 9:141731-141860   FP102759,CH242-92D2,9:128239-154503
(Clone quality: bE92D2 on chr=9; Num_of_Contigs=7; )
SNORA3   ENSSSCG00000019957 9:140534-140662   FP102759,CH242-92D2,9:128239-154503
(Clone quality: bE92D2 on chr=9; Num_of_Contigs=7; )
SNORA30   ENSSSCG00000019607 3:16327735-16327865   FP102572,CH242-151L13,3:16299451-16333428
(Clone quality: bE151L13 on chr=3; Num_of_Contigs=14; )
SNORA30   ENSSSCG00000019463 1:210905979-210906107   CU074306,CH242-81P8,1:210829799-211000372
(Clone quality: bE81P8 on chr=1; Num_of_Contigs=1; )
SNORA31   ENSSSCG00000018525 7:125045609-125045742   FP102139,CH242-526B21,7:125042756-125046477
(Clone quality: bE526B21 on chr=7; Num_of_Contigs=14; )
SNORA31   ENSSSCG00000019136 7:124788017-124788150   CU041307,CH242-24A8,7:124696417-124896527
(Clone quality: bE24A8 on chr=7; Num_of_Contigs=5; )
SNORA31   ENSSSCG00000018115 1:182352425-182352558   CU466938,CH242-265B3,1:182343414-182398256
(Clone quality: bE265B3 on chr=1; Num_of_Contigs=2; )
SNORA32   ENSSSCG00000019977 9:26392503-26392624   CU694898,CH242-364L8,9:26392035-26401420
(Clone quality: bE364L8 on chr=9; Num_of_Contigs=25; )
SNORA33   ENSSSCG00000018439 13:65418765-65418895   CU582855,CH242-31D16,13:65411430-65423804
(Clone quality: bE31D16 on chr=13; Num_of_Contigs=9; )
SNORA33   ENSSSCG00000018972 1:32410431-32410560   CU041311,CH242-393L4,1:32405122-32529539
(Clone quality: bE393L4 on chr=1; Num_of_Contigs=2; )
SNORA35   ENSSSCG00000018716 X:92427861-92427990 CU468335,CH242-247D14,X:92311862-92443789
(Clone quality: bE247D14 on chr=X; Num_of_Contigs=4; ) 		 
SNORA35   ENSSSCG00000019324 13:57093214-57093347   CU928558,CH242-268K10,13:57068957-57096867
(Clone quality: bE268K10 on chr=13; Num_of_Contigs=3; )
SNORA35   ENSSSCG00000019203 X:92026103-92026231 CU207399,CH242-408J11,X:91992792-92152223
(Clone quality: bE408J11 on chr=X; Num_of_Contigs=1; ) 		 
SNORA36   ENSSSCG00000019432 2:130895124-130895251 CU405718,CH242-289D23,2:130889835-131059832
(Clone quality: bE289D23 on chr=2; Num_of_Contigs=6; ) 		 
SNORA36   ENSSSCG00000019396 X:123696401-123696534 CU914693,CH242-146E2,X:123643095-123740591
(Clone quality: bE146E2 on chr=X; Num_of_Contigs=16; ) 		 
SNORA36   ENSSSCG00000018308 10:9823263-9823394   CU466937,CH242-214J10,10:9818215-9900412
(Clone quality: bE214J10 on chr=10; Num_of_Contigs=5; )
SNORA38   ENSSSCG00000018699 7:27701539-27701669 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
SNORA4   ENSSSCG00000019418 13:94184911-94185052   CU633961,CH242-82L2,13:94145951-94228460
(Clone quality: bE82L2 on chr=13; Num_of_Contigs=4; )
SNORA40   ENSSSCG00000019089 17:3479612-3479736   CU914517,CH242-54P16,17:3437354-3510193
(Clone quality: bE54P16 on chr=17; Num_of_Contigs=5; )
SNORA40   ENSSSCG00000018760 17:3375773-3375897   CU929507,CH242-133A17,17:3271296-3437353
(Clone quality: bE133A17 on chr=17; Num_of_Contigs=1; )
SNORA40   ENSSSCG00000018178 9:26388203-26388330   CU694898,CH242-364L8,9:26386311-26391934
(Clone quality: bE364L8 on chr=9; Num_of_Contigs=25; )
SNORA41   ENSSSCG00000019687 15:102226215-102226347   CU672272,CH242-171L9,15:102200633-102228689
(Clone quality: bE171L9 on chr=15; Num_of_Contigs=5; )
SNORA42   ENSSSCG00000019348 16:34149676-34149807   CU638682,CH242-34M9,16:34141896-34185386
(Clone quality: bE34M9 on chr=16; Num_of_Contigs=7; )
SNORA42   ENSSSCG00000019352 15:113484042-113484179   CU550681,CH242-392C2,15:113481745-113485183
(Clone quality: bE392C2 on chr=15; Num_of_Contigs=23; )
SNORA42   ENSSSCG00000019361 16:34323917-34324048   CU927893,CH242-113O5,16:34287603-34377854
(Clone quality: bE113O5 on chr=16; Num_of_Contigs=3; )
SNORA42   ENSSSCG00000019969 15:113468209-113468346   CU571033,CH242-277C20,15:113441147-113476744
(Clone quality: bE277C20 on chr=15; Num_of_Contigs=8; )
SNORA42   ENSSSCG00000019284 4:98057465-98057601   CU151868,CH242-286M6,4:97945564-98074701
(Clone quality: bE286M6 on chr=4; Num_of_Contigs=4; )
SNORA43   ENSSSCG00000019435 12:35660126-35660259   CU928876,CH242-112G14,12:35636225-35717646
(Clone quality: bE112G14 on chr=12; Num_of_Contigs=4; )
SNORA43   ENSSSCG00000019586 1:294207182-294207316   FP236151,CH242-517G10,1:294180904-294209678
(Clone quality: bE517G10 on chr=1; Num_of_Contigs=14; )
SNORA46   ENSSSCG00000018402 6:19293751-19293887   FP236140,CH242-255K9,6:19249406-19295908
(Clone quality: bE255K9 on chr=6; Num_of_Contigs=10; )
SNORA47   ENSSSCG00000019114 2:74849878-74850015   CU467996,CH242-497E12,2:74761261-74940301
(Clone quality: bE497E12 on chr=2; Num_of_Contigs=1; )
SNORA48   ENSSSCG00000018563 12:50067474-50067608 CU914279,CH242-411E2,12:49887557-50072341
(Clone quality: bE411E2 on chr=10; Num_of_Contigs=3; ) 		 
SNORA49   ENSSSCG00000018208 14:23099458-23099587   CU469455,CH242-337E6,14:23095887-23125972
(Clone quality: bE337E6 on chr=14; Num_of_Contigs=8; )
SNORA49   ENSSSCG00000019634 14:23204128-23204258   CU469318,CH242-114E11,14:23178600-23358435
(Clone quality: bE114E11 on chr=14; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-1800, 1801-1850, 1851-1900, 1901-1950, 1951-2000, 2001-2050, 2051-2100, 2101-2150, 2151-2200, 2201-2250, 2251-2300, 2301-2350, 2351-2400, 2401-2450, 2451-2500, 2501-2550, 2551-2600, 2601-16

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team