A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
APBB3   ENSSSCG00000014366 2:129321413-129328464   CU459055,CH242-430O11,2:129241445-129341031
(Clone quality: bE430O11 on chr=2; Num_of_Contigs=5; )
APC ENSSSCG00000017267 12:10664952-10676930   CU466252,CH242-76O22,12:10653725-10706182
(Clone quality: bE76O22 on chr=12; Num_of_Contigs=13; )
APC ENSSSCG00000016390 15:133559290-133560282   CU929673,CH242-75H18,15:133555168-133568456
(Clone quality: bE75H18 on chr=15; Num_of_Contigs=2; )
APC ENSSSCG00000014207 2:105636958-105764708    
APC ENSSSCG00000013351 2:36689468-36730205   CU571227,CH242-358C11,2:36681710-36731953
(Clone quality: bE358C11 on chr=2; Num_of_Contigs=10; )
APC ENSSSCG00000011274 13:20905977-20950024   CU861524,CH242-156J19,13:20905383-20993819
(Clone quality: bE156J19 on chr=13; Num_of_Contigs=6; )
APC ENSSSCG00000003738 6:82610839-82672971    
APC location ⇒ 2:105771585-105770758   CU856120,CH242-510G20,2:105764811-105772510
(Clone quality: bE510G20 on chr=2; Num_of_Contigs=10; )
APCDD1L   ENSSSCG00000007515 17:61277495-61326144    
APCS ENSSSCG00000006409 4:94529281-94533286   CU462853,CH242-45N13,4:94499396-94560276
(Clone quality: bE45N13 on chr=4; Num_of_Contigs=6; )
APCS location ⇒ 4:94079484-94080208   CU571050,CH242-515O19,4:94079464-94093534
(Clone quality: bE515O19 on chr=4; Num_of_Contigs=5; )
APEH ENSSSCG00000011385 13:26965258-26973958   CU914539,CH242-222N14,13:26945819-27078203
(Clone quality: bE222N14 on chr=13; Num_of_Contigs=2; )
APEH location ⇒ 13:26966870-26967035   CU914539,CH242-222N14,13:26945819-27078203
(Clone quality: bE222N14 on chr=13; Num_of_Contigs=2; )
APEH location ⇒ 13:26967199-26967339   CU914539,CH242-222N14,13:26945819-27078203
(Clone quality: bE222N14 on chr=13; Num_of_Contigs=2; )
APEH location ⇒ 13:26973007-26973203   CU914539,CH242-222N14,13:26945819-27078203
(Clone quality: bE222N14 on chr=13; Num_of_Contigs=2; )
APEH location ⇒ 13:26973694-26973954   CU914539,CH242-222N14,13:26945819-27078203
(Clone quality: bE222N14 on chr=13; Num_of_Contigs=2; )
APEX1 ENSSSCG00000002137 7:84890103-84892578   CT955972,CH242-231D20,7:84860540-84904248
(Clone quality: bE231D20 on chr=7; Num_of_Contigs=1; )
APEX1 location ⇒ 7:84890898-84890100   CT955972,CH242-231D20,7:84860540-84904248
(Clone quality: bE231D20 on chr=7; Num_of_Contigs=1; )
APEX1 location ⇒ 7:84891233-84891037   CT955972,CH242-231D20,7:84860540-84904248
(Clone quality: bE231D20 on chr=7; Num_of_Contigs=1; )
APEX1 location ⇒ 7:84891866-84891678   CT955972,CH242-231D20,7:84860540-84904248
(Clone quality: bE231D20 on chr=7; Num_of_Contigs=1; )
APEX1 location ⇒ 7:84892193-84892066   CT955972,CH242-231D20,7:84860540-84904248
(Clone quality: bE231D20 on chr=7; Num_of_Contigs=1; )
APEX2   ENSSSCG00000012348 X:47598527-47606014   CU856438,CH242-133L21,X:47584792-47628469
(Clone quality: bE133L21 on chr=X; Num_of_Contigs=8; )
APH1A   ENSSSCG00000006657 4:102775639-102779003   CU468675,CH242-4P3,4:102770988-102781211
(Clone quality: bE4P3 on chr=4; Num_of_Contigs=11; )
API5 ENSSSCG00000013285 2:17291625-17358323   CU633174,CH242-121G20,2:17262740-17450487
(Clone quality: bE121G20 on chr=2; Num_of_Contigs=4; )
API5 location ⇒ 2:17328029-17328487   CU633174,CH242-121G20,2:17262740-17450487
(Clone quality: bE121G20 on chr=2; Num_of_Contigs=4; )
API5 location ⇒ 2:17333820-17333957   CU633174,CH242-121G20,2:17262740-17450487
(Clone quality: bE121G20 on chr=2; Num_of_Contigs=4; )
API5L1 ENSSSCG00000013285 2:17291625-17358323   CU633174,CH242-121G20,2:17262740-17450487
(Clone quality: bE121G20 on chr=2; Num_of_Contigs=4; )
APIN ENSSSCG00000009266 8:119924963-119933735    
APIN location ⇒ 8:119925303-119924964   CU929598,CH242-240J23,8:119920751-119933353
(Clone quality: bE240J23 on chr=8; Num_of_Contigs=8; )
APIN location ⇒ 8:119926956-119926796   CU929598,CH242-240J23,8:119920751-119933353
(Clone quality: bE240J23 on chr=8; Num_of_Contigs=8; )
APIN location ⇒ 8:119929170-119929064   CU929598,CH242-240J23,8:119920751-119933353
(Clone quality: bE240J23 on chr=8; Num_of_Contigs=8; )
APIN location ⇒ 8:119932305-119932073   CU929598,CH242-240J23,8:119920751-119933353
(Clone quality: bE240J23 on chr=8; Num_of_Contigs=8; )
APIP   ENSSSCG00000013299 2:24519570-24540119 CU914647,CH242-254M19,2:24500034-24689730
(Clone quality: bE254M19 on chr=2; Num_of_Contigs=3; ) 		 
APITD1   ENSSSCG00000003403 6:47509650-47525984   CU929886,CH242-214O13,6:47459319-47565046
(Clone quality: bE214O13 on chr=6; Num_of_Contigs=3; )
APLF   ENSSSCG00000008346 3:67734876-67807677    
APLN location ⇒ X:104427090-104426914   CU928865,CH242-162N8,X:104421450-104429631
(Clone quality: bE162N8 on chr=X; Num_of_Contigs=8; )
APLN location ⇒ X:104427653-104427434   CU928865,CH242-162N8,X:104421450-104429631
(Clone quality: bE162N8 on chr=X; Num_of_Contigs=8; )
APLP1 ENSSSCG00000002916 6:30445529-30447696   CU466979,CH242-510C11,6:30445526-30447837
(Clone quality: bE510C11 on chr=6; Num_of_Contigs=10; )
APM1 location ⇒ 7:131808484-131808535   CU633632,CH242-139M12,7:131807603-131831335
(Clone quality: bE139M12 on chr=7; Num_of_Contigs=22; )
APM1 location ⇒ 7:45767390-45767469 CT009542,CH242-272H8,7:45714746-45890644
(Clone quality: bE272H8 on chr=7; Num_of_Contigs=13; ) 		 
APO-1 ENSSSCG00000010448 14:105826565-105852532   CT737322,CH242-203A14,14:105756080-105909175
(Clone quality: bE203A14 on chr=14; Num_of_Contigs=1; )
APOA1 ENSSSCG00000015070 9:43011531-43013681   CU582845,CH242-243D19,9:42983797-43024482
(Clone quality: bE243D19 on chr=9; Num_of_Contigs=5; )
APOA1 location ⇒ 9:43012279-43011675   CU582845,CH242-243D19,9:42983797-43024482
(Clone quality: bE243D19 on chr=9; Num_of_Contigs=5; )
APOA1 location ⇒ 9:43013077-43012921   CU582845,CH242-243D19,9:42983797-43024482
(Clone quality: bE243D19 on chr=9; Num_of_Contigs=5; )
APOA1 location ⇒ 9:43013320-43013255   CU582845,CH242-243D19,9:42983797-43024482
(Clone quality: bE243D19 on chr=9; Num_of_Contigs=5; )
APOA2 ENSSSCG00000006355 4:92745976-92747590   CU606874,CH242-28G15,4:92745461-92814223
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
APOA2 ENSSSCG00000006355 4:92745976-92747590   CU606874,CH242-28G15,4:92745461-92814223
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
APOA4 ENSSSCG00000015068 9:42996908-42999270   CU582845,CH242-243D19,9:42983797-43024482
(Clone quality: bE243D19 on chr=9; Num_of_Contigs=5; )
APOA4 location ⇒ 9:42996819-42996734   CU582845,CH242-243D19,9:42983797-43024482
(Clone quality: bE243D19 on chr=9; Num_of_Contigs=5; )
APOA4 location ⇒ 9:42997862-42996889   CU582845,CH242-243D19,9:42983797-43024482
(Clone quality: bE243D19 on chr=9; Num_of_Contigs=5; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-32

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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