A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
PLG location ⇒ 1:8109133-8109311 FP085554,CH242-84O6,1:8054542-8235565
(Clone quality: bE84O6 on chr=1; Num_of_Contigs=4; ) 		 
PLG location ⇒ 1:8126914-8127319 FP085554,CH242-84O6,1:8054542-8235565
(Clone quality: bE84O6 on chr=1; Num_of_Contigs=4; ) 		 
PLGF location ⇒ 7:106409616-106409538   CT797477,CH242-140C11,7:106390600-106458378
(Clone quality: bE140C11 on chr=7; Num_of_Contigs=2; )
PLGF location ⇒ 7:106410634-106410436   CT797477,CH242-140C11,7:106390600-106458378
(Clone quality: bE140C11 on chr=7; Num_of_Contigs=2; )
PLGF location ⇒ 7:106416454-106416189   CT797477,CH242-140C11,7:106390600-106458378
(Clone quality: bE140C11 on chr=7; Num_of_Contigs=2; )
PLIN   ENSSSCG00000001844 7:60662143-60676154   CT737411,CH242-149F11,7:60651189-60738814
(Clone quality: bE149F11 on chr=7; Num_of_Contigs=3; )
PLIN4   ENSSSCG00000013512 2:48702269-48711216    
PLIN5   ENSSSCG00000013513 2:48716288-48725433   CU972396,CH242-401E10,2:48706443-48734965
(Clone quality: bE401E10 on chr=2; Num_of_Contigs=4; )
PLK2   ENSSSCG00000016925 16:35374482-35380481   CU914321,CH242-270D14,16:35371804-35396519
(Clone quality: bE270D14 on chr=16; Num_of_Contigs=4; )
PLK3 ENSSSCG00000003928 6:119351085-119355913   CU928738,CH242-6J15,6:119339955-119396828
(Clone quality: bE6J15 on chr=6; Num_of_Contigs=6; )
PLK4 ENSSSCG00000009076 8:83546053-83625511    
PLK4 location ⇒ 8:83557538-83557343   FP102002,CH242-142F22,8:83533048-83571851
(Clone quality: bE142F22 on chr=8; Num_of_Contigs=3; )
PLK4 location ⇒ 8:83561346-83560321   FP102002,CH242-142F22,8:83533048-83571851
(Clone quality: bE142F22 on chr=8; Num_of_Contigs=3; )
PLK4 location ⇒ 8:83615635-83615440   FP236524,CH242-136K15,8:83603796-83654804
(Clone quality: bE136K15 on chr=8; Num_of_Contigs=3; )
PLK4 location ⇒ 8:83619440-83618415   FP236524,CH242-136K15,8:83603796-83654804
(Clone quality: bE136K15 on chr=8; Num_of_Contigs=3; )
PLK5P   ENSSSCG00000013434 2:46542519-46550190   CU972485,CH242-416N2,2:46524462-46568465
(Clone quality: bE416N2 on chr=2; Num_of_Contigs=2; )
PLLP   ENSSSCG00000002818 6:20056843-20062993   FP102873,CH242-277I7,6:20046883-20107879
(Clone quality: bE277I7 on chr=6; Num_of_Contigs=4; )
PLN ENSSSCG00000004248 1:45243664-45253241   CU655900,CH242-162D20,1:45239157-45309340
(Clone quality: bE162D20 on chr=1; Num_of_Contigs=2; )
PLN location ⇒ 1:45241904-45241813   CU655900,CH242-162D20,1:45239157-45309340
(Clone quality: bE162D20 on chr=1; Num_of_Contigs=2; )
PLN location ⇒ 1:45243324-45243193   CU655900,CH242-162D20,1:45239157-45309340
(Clone quality: bE162D20 on chr=1; Num_of_Contigs=2; )
PLN location ⇒ 1:45244250-45243576   CU655900,CH242-162D20,1:45239157-45309340
(Clone quality: bE162D20 on chr=1; Num_of_Contigs=2; )
PLN location ⇒ 1:45253267-45253167   CU655900,CH242-162D20,1:45239157-45309340
(Clone quality: bE162D20 on chr=1; Num_of_Contigs=2; )
PLOD1 ENSSSCG00000003433 6:48861113-48891422   CU695168,CH242-2E14,6:48812011-48903740
(Clone quality: bE2E14 on chr=6; Num_of_Contigs=4; )
PLOD1 location ⇒ 6:48870541-48870709   CU695168,CH242-2E14,6:48812011-48903740
(Clone quality: bE2E14 on chr=6; Num_of_Contigs=4; )
PLOD1 location ⇒ 6:48890867-48891154   CU695168,CH242-2E14,6:48812011-48903740
(Clone quality: bE2E14 on chr=6; Num_of_Contigs=4; )
PLOD1 location ⇒ 6:48997118-48996950   FP102316,CH242-204J17,6:48990044-48999695
(Clone quality: bE204J17 on chr=6; Num_of_Contigs=9; )
PLOD1 location ⇒ 6:49040360-49040647   FP102316,CH242-204J17,6:49035778-49047016
(Clone quality: bE204J17 on chr=6; Num_of_Contigs=9; )
PLOD2   ENSSSCG00000011689 13:70572803-70628295   CU855741,CH242-319B9,13:70447513-70637414
(Clone quality: bE319B9 on chr=13; Num_of_Contigs=2; )
PLP ENSSSCG00000012536 X:82356041-82372396   FP015842,CH242-149K17,X:82322663-82377772
(Clone quality: bE149K17 on chr=X; Num_of_Contigs=5; )
PLP location ⇒ X:82365594-82365782   FP015842,CH242-149K17,X:82322663-82377772
(Clone quality: bE149K17 on chr=X; Num_of_Contigs=5; )
PLP location ⇒ X:82366456-82366717   FP015842,CH242-149K17,X:82322663-82377772
(Clone quality: bE149K17 on chr=X; Num_of_Contigs=5; )
PLP location ⇒ X:82367793-82367966   FP015842,CH242-149K17,X:82322663-82377772
(Clone quality: bE149K17 on chr=X; Num_of_Contigs=5; )
PLP location ⇒ X:82371915-82372481   FP015842,CH242-149K17,X:82322663-82377772
(Clone quality: bE149K17 on chr=X; Num_of_Contigs=5; )
PLP1   ENSSSCG00000012536 X:82356041-82372396   FP015842,CH242-149K17,X:82322663-82377772
(Clone quality: bE149K17 on chr=X; Num_of_Contigs=5; )
PLP2 ENSSSCG00000012294 X:42696520-42699471   FP067404,CH242-247J8,X:42680766-42706990
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
PLP2 location ⇒ X:42696926-42696530   FP067404,CH242-247J8,X:42680766-42706990
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
PLP2 location ⇒ X:42697874-42697776   FP067404,CH242-247J8,X:42680766-42706990
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
PLP2 location ⇒ X:42698121-42697968   FP067404,CH242-247J8,X:42680766-42706990
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
PLP2 location ⇒ X:42699405-42699208   FP067404,CH242-247J8,X:42680766-42706990
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
PLRG1   ENSSSCG00000008996 8:63974808-63991046   CU694669,CH242-131H20,8:63973597-64050873
(Clone quality: bE131H20 on chr=8; Num_of_Contigs=9; )
PLS3   ENSSSCG00000012597 X:92834015-92920193    
PLSCR4 ENSSSCG00000011690 13:70668942-70698710   CU855852,CH242-90H6,13:70661837-70722848
(Clone quality: bE90H6 on chr=13; Num_of_Contigs=3; )
PLSCR4 location ⇒ 13:70669460-70669550   CU855852,CH242-90H6,13:70661837-70722848
(Clone quality: bE90H6 on chr=13; Num_of_Contigs=3; )
PLSCR4 location ⇒ 13:70670342-70670503   CU855852,CH242-90H6,13:70661837-70722848
(Clone quality: bE90H6 on chr=13; Num_of_Contigs=3; )
PLSCR4 location ⇒ 13:70671890-70672055   CU855852,CH242-90H6,13:70661837-70722848
(Clone quality: bE90H6 on chr=13; Num_of_Contigs=3; )
PLSCR4 location ⇒ 13:70673596-70673703   CU855852,CH242-90H6,13:70661837-70722848
(Clone quality: bE90H6 on chr=13; Num_of_Contigs=3; )
PLSCR5   ENSSSCG00000011691 13:70748889-70762990   CU633217,CH242-142C18,13:70727849-70789395
(Clone quality: bE142C18 on chr=13; Num_of_Contigs=4; )
PLTP ENSSSCG00000007434 17:50215735-50222549   CU407252,CH242-441N18,17:50215714-50222576
(Clone quality: bE441N18 on chr=17; Num_of_Contigs=7; )
PLTP location ⇒ 13:18154699-18156191   CU856332,CH242-416J21,13:18153113-18162056
(Clone quality: bE416J21 on chr=13; Num_of_Contigs=14; )
PLUNC ENSSSCG00000007260 17:38674719-38681769   CU467098,CH242-181C3,17:38585383-38773516
(Clone quality: bE181C3 on chr=17; Num_of_Contigs=1; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-1150, 1151-1200, 1201-1250, 1251-1300, 1301-1350, 1351-1400, 1401-1450, 1451-1500, 1501-1550, 1551-1600, 1601-1650, 1651-1700, 1701-1750, 1751-1800, 1801-1850, 1851-1900, 1901-1950, 1951-2000, 2001-2050, 2051-2100, 2101-2150, 2151-2200, 2201-21

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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