| QTL Map Information |
|---|
| Chromosome: | 18 |
| QTL Peak Location: | 52.59 (cM) |
| QTL Span: | 52.59-52.59 (cM)
39.8-39.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81469316 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 5.49E-03 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Pigs were from an inbred Berkshire population. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for intramuscular fat content. A total of 40,191 SNPs were used for analysis. |
| Analysis: | A single trait, univariate linear mixed model was used. |
| Software: | GEMMA, GCTA |
| Notes: | |
| Reference |
|---|
| Authors: | Won S, Jung J, Park E, Kim H |
| Affiliation: | CHO&KIM genomics, Seoul 05836, Korea |
| Title: | Identification of genes related to intramuscular fat content of pigs using genome-wide association study |
| Journal: | Asian-Australasian journal of animal sciences, 2018, 31(2): 157-162 |
| Links: |
PubMed | Abstract | List all data
|
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