QTLdb and CorrDB functionality may be coming to an end

The QTLdb and CorrDB are no longer actively funded. This means that in the near future, these data and associated tools will no longer be actively updated unless additional funding sources are identified. QTLdb and CorrDB have been actively funded by grants for more than 20 and 10 years respectively. We will continue to search for alternative funding sources and will provide additional updates when these resources may have to move to a static state.

 

Release 25
(Aug 26, 2025)
Animal Trait Correlation Database
Genetic and phenotypic trait correlation studies have been conducted for decades since Hazel proposed the methods in 1943. A genetic correlation is the proportion of shared variance between two traits that is due to genetic causes; a phenotypic correlation is the degree to which two traits co-vary among individuals in a population. In the genomics era, while gene expression, genetic association, and network analysis provide unprecedented means to decode the genetic basis of complex phenotypes, it is important to recognize the possible effects genetic progress in one trait can have on other traits. This database is designed to collect all published livestock genetic/phenotypic trait correlation data, aimed at facilitating genetic network analysis or systems biology studies.

As of the current Release, a total of 46,562 correlation data on 967 base traits and 433 trait variants; 7,871 heritability data on 1,190 base traits and 418 trait variants, in 6 livestock animal species have been curated from 800 publications. Since the last data release, we have additional 1,502 newly curated correlations and 252 heribility data in 7 species, to be released soon.

Cattle Chicken Goat Horse Pig Sheep
Release 25: Curated Data
Species Correlations Heritability
CountTraits CountTraits
Cattle 17,220370 3,036428
Chicken 5,449113 861171
Goat 4,00390 52385
Horse 22430 14257
Pig 13,045240 2,099287
Sheep 6,621124 1,210162
Sum46,562967 7,8711,190
Last 30 days visitor activities
  • Web visits: 78,627 (hits)
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  • Correlation by unique trait pairs by species
    Species Corr.Types CattleChickenGoatHorsePigSheepSUM
    Environment 282 
    (709)
    79 
    (395)

    (25)

    (2)
    26 
    (217)
    50 
    (196)
    443 
    (1,544)
    Genetic 3,385 
    (9,023)
    587 
    (2,299)
    510 
    (1,754)
    80 
    (120)
    2,020 
    (7,035)
    850 
    (3,217)
    7,432 
    (23,448)
    Phenotypic 3,648 
    (6,968)
    715 
    (2,755)
    742 
    (2,157)
    56 
    (87)
    1,962 
    (5,602)
    803 
    (2,985)
    7,926 
    (20,554)
    Residual 359 
    (520)
    10 
    (67)
    12 
    (15)
    39 
    (191)
    32 
    (223)
    452 
    (1,016)
    SUM7,674
    (17,220)
    1,381
    (5,449)
    1,267
    (4,003)
    149
    (224)
    4,047
    (13,045)
    1,735
    (6,621)
    16,253 
    (46,562)
    Note: Bold numbers represent counts of correlation trait pairs;
    In parenthesis are counts of multiple correlations reported.
    Heritability data reported by species
    # ReportsCattle Traits
    155Milk yield
    136Body weight
    90Subcutaneous fat thickness
    64Longissimus muscle area
    61Milk fat yield
    60Average daily gain
    58Milk protein yield
    51Somatic cell score
    48Marbling score
    46Milk protein percentage
    46Milk fat percentage
    44Carcass weight
    40Scrotal circumference
    37Dry matter intake
    36Body height
    34Residual feed intake
    32Calving to conception interval
    29Calving interval
    28Shear force
    28Clinical mastitis
    27Age at first calving
    27Interval to first estrus after calving
    23Intramuscular fat
    21Metabolic body weight
    20Interval from first to last insemination
    20Inseminations per conception
    20Teat placement
    18Sperm motility
    18Body condition score
    18Gestation length
    17Rump width
    17Body circumference
    17Udder depth
    17Udder cleft
    16Muscularity
    16Udder attachment
    15Milk lactose content
    15Milk lactose yield
    15Stature
    15Dressing percentage
    14M. paratuberculosis susceptibility
    14Conception rate
    14Yield grade
    14Body depth
    14Non-return rate
    14Udder height
    14Conformation score
    13Semen volume
    13Meat color
    13Milk palmitic acid content
    13Milk myristic acid content
    13Milk oleic acid content
    13Milk stearic acid content
    12Milk capric acid content
    12Milk lauric acid content
    12Feet and leg conformation
    12Milk saturated fatty acid content
    # ReportsChicken Traits
    148Body weight
    63Egg weight
    59Egg number
    23Shank length
    21Meat color
    19Abdominal fat percentage
    17Age at first egg
    17Abdominal fat weight
    15Eggshell strength
    15Feed intake
    14Residual feed intake
    14Muscle pH
    14Carcass weight
    12Shank circumference
    12Average daily gain
    12Feed conversion ratio
    12Breast muscle percentage
    10Gizzard weight
    10Body weight gain
    10Eggshell shape
    10Liver weight
    9Eggshell thickness
    8Albumen height
    8Heart weight
    8Breast muscle weight
    6Egg production rate
    6Drip loss
    6Ascites syndrome incidence
    6Eggshell color
    5Metabolic body weight
    5White striping
    4Age at sexual maturity
    4Wooden breast
    4Comb height
    4Drumstick weight
    4Triglyceride level
    4Blood globulin level
    4Keel length
    4Eggshell stiffness
    4Sudden death syndrome susceptibility
    4Blood bile acid level
    4Proventriculus weight
    4Intramuscular fat percentage
    4Haugh units
    4Blood albumin to globulin ratio
    4Blood uric acid level
    4Drumstick and thigh percentage
    3Blood alanine transaminase level
    3Blood aspartate transaminase level
    3Yolk number
    3HDL/LDL ratio
    3LDL cholesterol level
    3Chest width
    3Blood creatinine level
    3Blood gamma-glutamyltranspeptidase level
    3AST to ALT ratio
    3Feathering
    # ReportsGoat Traits
    78Body weight
    35Milk yield
    32Average daily gain
    26Kleiber ratio
    25Kidding interval
    20Age at first kidding
    15Milk protein yield
    15Milk fat yield
    14Body height
    14Somatic cell score
    13Body circumference
    13Body length
    10Milk fat percentage
    10Milk protein percentage
    9Offspring number
    7Udder attachment
    7Milk protein-to-fat ratio
    6Fecal egg count
    5Milk protein content
    5Hematocrit
    5Litter weight, total
    5Teat placement
    5Milk fat content
    4Milk conjugated linoleic acid content
    4Milk octadecenoic acid content
    4Sperm motility
    4Milk monounsaturated fatty acid content
    4Milk capric acid content
    4Milk butyric acid content
    4Milk lauric acid content
    4Medial suspensory ligament
    4Milk omega-6 fatty acid content
    4Milk unsaturated fatty acid content
    4Milk polyunsaturated fatty acid content
    4Milk saturated fatty acid content
    4Milk sum of C13:0 to C17:0 fatty acid content
    4Milk palmitic acid content
    4Milk myristic acid content
    4Milk caprylic acid content
    4Milk sum of C4:0 to C10:0 fatty acid content
    4Milk caproic acid content
    4Milk omega-3 fatty acid content
    4Milk stearic acid content
    3Marbling score
    3Teat diameter
    3Milk solids yield
    3Milk lactose yield
    3Udder depth
    3Body condition score
    3Teat angle
    3Teat shape
    3Rear udder height
    2Somatic cell count
    2Lactation persistency
    2Lactation length
    2Teat length
    2Teat number
    # ReportsHorse Traits
    12Insect bite hypersensitivity
    12Recurrent exertional rhabdomyolysis
    8Tendon injury
    8Recurrent uveitis
    7Bone fracture
    6Body height
    6Strongyle fecal egg count
    4Suspensory ligament injury
    4Vitiligo
    4Osteoarthritis
    3Strongyle infection
    3twinning
    3Sperm progressive motility
    2Sperm count
    2Hematocrit
    2Epistaxis
    2Skinfold thickness
    2Walk score
    2Hair shaft diameter
    2Hoof conformation
    2Semen volume
    2Lymphocyte number
    2Sperm concentration
    2Body condition score
    2Neutrophil number
    2Conformation score
    2chronic progressive lymphedema
    2Trot score
    2Equine sarcoids
    2Gestation length
    2Leg conformation
    1racing performance
    1Leptin level
    1Plasma protein level
    1Blood lactate level
    1Aspartate aminotransferase activity
    1Blood glucose level
    1Hemoglobin
    1Eosinophil number
    1Blood creatinine level
    1ACTH level
    1Red blood cell number
    1Racing speed
    1Creatine kinase level
    1Insulin level
    1White blood cell number
    1Triglyceride level
    1Blood adiponectin level
    1Chest circumference
    1Cannon bone circumference
    1Uric acid level
    1Number of progressively motile sperm
    1Blood non-esterified fatty acid level
    1hereditary equine regional dermal asthenia
    1Recurrent laryngeal neuropathy
    1Equine neuroaxonal dystrophy/degenerative myeloencephalopathy
    1Lactate dehydrogenase level
    # ReportsPig Traits
    329Offspring number
    110Meat color
    101Subcutaneous fat thickness
    81Average daily gain
    38Muscle pH
    32Body weight
    32Teat number
    31Litter weight, total
    29Feed intake
    27Longissimus muscle area
    25Feed conversion ratio
    21Semen volume
    21Longissimus muscle depth
    21Sperm concentration
    20Sperm abnormality rate
    19Linoleic acid content
    19Oleic acid content
    19Palmitic acid content
    19Stearic acid content
    18Sperm motility
    18Sperm progressive motility
    18Body circumference
    18Palmitoleic acid content
    17Days to 100 kg
    17Time spent in feeder
    17Intramuscular fat content
    17Residual feed intake
    17Myristic acid content
    17Lean meat percentage
    16Polyunsaturated fatty acid content
    16Saturated fatty acid content
    16Monounsaturated fatty acid content
    16Carcass weight
    13Body length
    13Carcass length
    12Sperm per ejaculate
    12Drip loss
    12Linolenic acid content
    12Body height
    10Cannon bone circumference
    10Eicosadienoic acid content
    10Arachidonic acid content
    10Arachidic acid content
    9Cooking loss
    9Number of functional sperm
    9Number of visits to feeder
    9cis-11-Eicosenoic acid content
    9Water holding capacity
    9Marbling
    8Omega-6 fatty acid content
    8Shear force
    8Days to 105 kg
    8Omega-6 to omega-3 fatty acid ratio
    8Average feeding rate
    8Dihomo-gamma-linolenic acid content
    8Omega-3 fatty acid content
    8Age at first farrowing
    # ReportsSheep Traits
    319Body weight
    104Average daily gain
    75Offspring number
    50Greasy fleece weight
    42Staple length
    39Kleiber ratio
    38Fecal egg count
    26Fleece grade
    18Residual feed intake
    17Milk yield
    17Mean fiber diameter
    17Feed conversion ratio
    16Subcutaneous fat thickness
    14Somatic cell score
    14Body condition score
    14Body height
    10Gastrointestinal nematode resistance
    10Ocular mucosa coloration
    10Longissimus muscle depth
    9Body length
    9Meat color
    9Milk protein percentage
    9Sperm motility
    9Perineal fecal accumulation
    8Body circumference
    8Shear force
    8Milk protein yield
    8Milk fat percentage
    8Milk fat yield
    7Sperm concentration
    7Litter weight, total
    7Growth efficiency
    7Fiber diameter coefficient of variance
    7Semen volume
    7Relative growth rate
    7Hematocrit
    7Clean fleece weight
    7Scrotal circumference
    6Body depth
    6Longissimus muscle area
    6Fleece yield
    5udder attachment
    5Teat placement
    5Teat size
    5udder depth
    4Milk protein content
    4Fiber curvature
    4Fiber diameter standard deviation
    4Milk fat content
    4Tick count
    4somatic cell count
    4Dressing percentage
    4Staple strength
    4Feed intake
    3Cheese yield
    3Lameness
    3Lambing interval
    New Data: If you found correlation data that has not been included in the current release, please either (1) register for a curator account to directly input them (see "Database Curators / Editors" below), or (2) inform our Bioinformatics Team so that we can include your data for curation.
    Database Curators / Editors: The CorrDB is open to the public for data entry and update. By having a curator account on the CorrDB, you will be granted privileges to input and edit the database entries.
    Questions and Answers: Frequently asked questions and answers to address the questions raised with regard to the design, usage, application, utilities, new developments, and other related issues in the development of CorrDB.
    Data downloads:
    ( Release 25 )
    ‣ tab delimited
    ‣ plain text
    ‣ gzip compressed
    Correlation data: Cattle
    Correlation data: Chicken
    Correlation data: Goat
    Correlation data: Horse
    Correlation data: Pig
    Correlation data: Sheep
    Heritability data: Cattle
    Heritability data: Chicken
    Heritability data: Goat
    Heritability data: Horse
    Heritability data: Pig
    Heritability data: Sheep

     

    REFERENCE:
    Zhi-Liang Hu, Carissa A. Park, and James M. Reecy (2022). Bringing the Animal QTLdb and CorrDB into the future: meeting new challenges and providing updated services. Nucleic Acids Research, Volume 50, Issue D1, Pages D956–D961. DOI: 10.1093/nar/gkab1116

    Zhi-Liang Hu, Carissa A. Park, and James M. Reecy (2020). An Update on Database Growth and Improvements of Animal QTLdb and CorrDB. Plant & Animal Genomes XXVII Conference, January 11-15, 2020. Town & Country Convention Center, San Diego, CA. (January 11-15, 2020).

    Zhi-Liang Hu, Carissa A. Park, and James M. Reecy (2019). Building a livestock genetic and genomic information knowledgebase through integrative developments of Animal QTLdb and CorrDB. Nucleic Acids Research, Volume 47, Issue D1, 8 January 2019, Pages D701–D710. DOI: 10.1093/nar/gky1084

    Zhi-Liang Hu, Carissa A. Park, and James M. Reecy (2018). Development of Animal QTLdb and CorrDB: Resynthesizing Big Data to Improve Meta-analysis of Genetic and Genomic Information. The 11th World Congress on Genetics Applied to Livestock Production (WCGALP). New Zealand, February 11-16, 2018.

    Zhi-Liang Hu, Carissa A. Park, and James M. Reecy (2018). Animal QTLdb and CorrDB updates: integrative development of genetics/genomics databases and tools to meet new challenges. Plant & Animal Genomes XXVI Conference, January 13-17, 2018. Town & Country Convention Center, San Diego, CA.

    Zhi-Liang Hu, Dinesh Kumar, and James Reecy. (2013). CorrDB: A livestock animal genetic/phenotypic trait correlation database. Plant & Animal Genomes XX Conference, January 11-16, 2013. Town & Country Convention Center, San Diego, CA.|/icons/links/PAG_logo.png|2

    Related resources:     ·  VT | LPT | LBO | CMO  ·  ·  MIQAS  ·  ·  MIBBI  ·  ·  MI  ·  ·  QTLdb  · 

     

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